ggKbase home page

L3_133_000M1_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 206 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_2_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..1206
DNA (1206bp) protein (402aa)
Ferrous iron transport protein B n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KRW1_OSCVS
feoB; ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:BAK99977.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_133_000M1_scaffold_2_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(1264..2148)
DNA (885bp) protein (295aa)
pscK; pseudouridine kinase (EC:2.7.1.-)
HTH domain protein n=2 Tax=root RepID=R5B3U3_9FIRM
HTH domain protein {ECO:0000313|EMBL:CCX47577.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_2_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(2145..4556)
DNA (2412bp) protein (804aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B069_9FIRM
L3_133_000M1_scaffold_2_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(4591..5694)
DNA (1104bp) protein (368aa)
glgD; glycogen biosynthesis protein GlgD (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX67_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CCX47573.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_2_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5691..6890)
DNA (1200bp) protein (400aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
glgC; glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3T8_9FIRM
L3_133_000M1_scaffold_2_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(7034..7621)
DNA (588bp) protein (196aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B833_9FIRM
L3_133_000M1_scaffold_2_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(7621..8583)
DNA (963bp) protein (321aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=2 Tax=root RepID=R5AW75_9FIRM
L3_133_000M1_scaffold_2_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

8847..9908
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47567.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_2_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

9936..11348
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=4 Tax=root RepID=R5B831_9FIRM
L3_133_000M1_scaffold_2_10
Firmicutes bacterium CAG:24, Firmicutes, Bacteria

Not on your lists

comp(11894..13708)
DNA (1815bp) protein (605aa)
ABC-type multidrug transport system ATPase and permease components n=1 Tax=Firmicutes bacterium CAG:24 RepID=R5HB41_9FIRM
ABC-type multidrug transport system ATPase and permease components {ECO:0000313|EMBL:CCY21951.1}; TaxID=1263012 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:24.;"
putative ABC transporter
L3_133_000M1_scaffold_2_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13711..15834)
DNA (2124bp) protein (708aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW47_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99704.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L3_133_000M1_scaffold_2_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15822..16280)
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWB8_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCX47303.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
transcriptional regulator
L3_133_000M1_scaffold_2_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(16469..17956)
DNA (1488bp) protein (496aa)
SSS sodium solute transporter superfamily n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWK7_9FIRM
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CCX47388.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
SSS sodium solute transporter superfamily
L3_133_000M1_scaffold_2_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

18192..19067
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B7G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47386.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
LysR family transcriptional regulator
L3_133_000M1_scaffold_2_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(19141..19809)
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3Z9_9FIRM
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:CCX46201.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hydrogenase accessory protein HypB
L3_133_000M1_scaffold_2_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

19961..22171
DNA (2211bp) protein (737aa)
Polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT95_9FIRM
Polyphosphate kinase {ECO:0000313|EMBL:CCX46203.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_2_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

22418..23611
DNA (1194bp) protein (398aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW62_9FIRM
L3_133_000M1_scaffold_2_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(23707..24513)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS41_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46205.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_2_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(24633..25400)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B402_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46206.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_2_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(25354..25971)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B402_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46206.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L,D-transpeptidase catalytic domain protein
L3_133_000M1_scaffold_2_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(25987..26277)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=root RepID=R5AZP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46207.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_2_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(26402..28393)
DNA (1992bp) protein (664aa)
Penicillin-binding protein 1A family n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATA1_9FIRM
Penicillin-binding protein 1A family {ECO:0000313|EMBL:CCX46208.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative penicillin-binding protein
L3_133_000M1_scaffold_2_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

28648..28971
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46209.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_2_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

29043..29345
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46210.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_2_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

29774..30820
DNA (1047bp) protein (349aa)
Threonine aldolase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B405_9FIRM
Threonine aldolase {ECO:0000313|EMBL:CCX46211.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
threonine aldolase
L3_133_000M1_scaffold_2_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(30882..31580)
DNA (699bp) protein (233aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
gidB; methyltransferase GidB (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZQ2_9FIRM
L3_133_000M1_scaffold_2_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(31848..32897)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B818_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47546.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative cell wall hydrolase
L3_133_000M1_scaffold_2_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(33247..33489)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47547.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_2_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

33600..34649
DNA (1050bp) protein (350aa)
Stage II sporulation protein P n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX15_9FIRM
Stage II sporulation protein P {ECO:0000313|EMBL:CCX45277.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
spoIIP; stage II sporulation protein P
L3_133_000M1_scaffold_2_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

34750..35178
DNA (429bp) protein (143aa)
CBS domains protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQL8_9FIRM
CBS domains protein {ECO:0000313|EMBL:CCX45278.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
signal transduction protein with CBS domains
Displaying items 1-30 of 206 in total

View Taxonomy