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L3_133_000M1_scaffold_7

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Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_7_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

181..1113
DNA (933bp) protein (311aa)
Glycosyltransferases involved in cell wall biogenesis (EC:2.7.8.- 2.4.1.83)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MY04_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCY96625.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1113..2084
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96624.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_7_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2081..3373
DNA (1293bp) protein (431aa)
Carbamoylphosphate synthase large subunit (Split gene in MJ) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYU7_9FIRM
Carbamoylphosphate synthase large subunit (Split gene in MJ) {ECO:0000313|EMBL:CCY96623.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Carbamoylphosphate synthase large subunit (split gene in MJ)
L3_133_000M1_scaffold_7_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3462..4592
DNA (1131bp) protein (377aa)
TDP-4-keto-6-deoxy-D-glucose transaminase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHP2_9FIRM
TDP-4-keto-6-deoxy-D-glucose transaminase {ECO:0000313|EMBL:CCY96622.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
TDP-4-keto-6-deoxy-D-glucose transaminase
L3_133_000M1_scaffold_7_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4611..5921
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96621.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
D-alanyl-D-alanine carboxypeptidase
L3_133_000M1_scaffold_7_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5938..6495
DNA (558bp) protein (186aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MXZ9_9FIRM
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CCY96620.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6563..7201
DNA (639bp) protein (213aa)
ABC-type polysaccharide/polyol phosphate export systems permease component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y6_9FIRM
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_133_000M1_scaffold_7_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7307..8635
DNA (1329bp) protein (443aa)
ABC-type polysaccharide/polyol phosphate transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYU3_9FIRM
ABC-type polysaccharide/polyol phosphate transport system ATPase component {ECO:0000313|EMBL:CCY96618.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_133_000M1_scaffold_7_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8650..14289
DNA (5640bp) protein (1880aa)
Predicted glycosyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHN6_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CCY96617.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosyltransferases
L3_133_000M1_scaffold_7_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14265..16712
DNA (2448bp) protein (816aa)
Predicted glycosyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH08_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CCY96616.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosyltransferases
L3_133_000M1_scaffold_7_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16725..18164
DNA (1440bp) protein (480aa)
Predicted membrane protein (DUF2142) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MXZ4_9FIRM
Predicted membrane protein (DUF2142) {ECO:0000313|EMBL:CCY96615.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted membrane protein (DUF2142).
L3_133_000M1_scaffold_7_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18333..19583)
DNA (1251bp) protein (417aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3Y2_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCY96614.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19765..21624
DNA (1860bp) protein (620aa)
Predicted glycosyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYT9_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CCY96613.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosyltransferases
L3_133_000M1_scaffold_7_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21629..22585
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96612.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted glycosyltransferases
L3_133_000M1_scaffold_7_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22694..24097
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH05_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96611.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Undecaprenyl-phosphate glucose phosphotransferase
L3_133_000M1_scaffold_7_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24116..25549
DNA (1434bp) protein (478aa)
Cell envelope-related function transcriptional attenuator common domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MXZ3_9FIRM
Cell envelope-related function transcriptional attenuator common domain {ECO:0000313|EMBL:CCY96610.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cell envelope-related function transcriptional attenuator common domain
L3_133_000M1_scaffold_7_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25587..26549
DNA (963bp) protein (321aa)
Glycosyltransferase group 2 family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3X9_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CCY96609.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_133_000M1_scaffold_7_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26674..28350
DNA (1677bp) protein (559aa)
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYT6_9FIRM
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CCY96608.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_133_000M1_scaffold_7_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28523..29908
DNA (1386bp) protein (462aa)
Endopeptidase Clp ATP-binding regulatory subunit (ClpX) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHM4_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|SAAS:SAAS00063387}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
endopeptidase Clp ATP-binding regulatory subunit (clpX)
L3_133_000M1_scaffold_7_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29948..30589
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NH02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96606.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_7_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30668..32308
DNA (1641bp) protein (547aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MXY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96605.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32611..35967
DNA (3357bp) protein (1119aa)
Protein kinase domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3X5_9FIRM
Protein kinase domain {ECO:0000313|EMBL:CCY96604.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Protein kinase domain.
L3_133_000M1_scaffold_7_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35996..36697)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96603.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36711..37061)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHL8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96602.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_7_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37657..38733
DNA (1077bp) protein (359aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_01209}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
carbamoyl-phosphate synthase, small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NGZ7_9FIRM
L3_133_000M1_scaffold_7_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38733..41948
DNA (3216bp) protein (1072aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MXY4_9FIRM
L3_133_000M1_scaffold_7_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

42107..43009
DNA (903bp) protein (301aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3X3_9FIRM
L3_133_000M1_scaffold_7_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43049..43975
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96598.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_7_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

43993..45654
DNA (1662bp) protein (554aa)
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHL4_9FIRM
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC {ECO:0000313|EMBL:CCY96597.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC
L3_133_000M1_scaffold_7_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

45740..48502
DNA (2763bp) protein (921aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NGZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96596.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
poly(glucosyl N-acetylgalactosamine 1-phosphate)
Displaying items 1-30 of 193 in total

View Taxonomy