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L3_133_000M1_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 96 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_39_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(1..777)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45383.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
conserved hypothetical protein
L3_133_000M1_scaffold_39_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(1045..1272)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APT5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45385.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_39_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(2045..2680)
DNA (636bp) protein (212aa)
Bacterial group 2 Ig-like protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1R1_9FIRM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:CCX45386.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Ig domain protein group 2 domain protein
L3_133_000M1_scaffold_39_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(2794..4152)
DNA (1359bp) protein (453aa)
Germination protein YpeB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXC5_9FIRM
Germination protein YpeB {ECO:0000313|EMBL:CCX45387.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ypeB; Sporulation protein ypeB
L3_133_000M1_scaffold_39_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(4214..4888)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45388.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_39_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(4894..6384)
DNA (1491bp) protein (497aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATW3_9FIRM
L3_133_000M1_scaffold_39_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

6546..7559
DNA (1014bp) protein (338aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=2 Tax=root RepID=R5APU0_9FIRM
L3_133_000M1_scaffold_39_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

7587..8765
DNA (1179bp) protein (393aa)
Glycosyltransferase group 4 family n=3 Tax=root RepID=R5B1R6_9FIRM
Glycosyltransferase group 4 family {ECO:0000313|EMBL:CCX45391.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L3_133_000M1_scaffold_39_9
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

8749..9897
DNA (1149bp) protein (383aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IDM0_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CDB43466.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
L3_133_000M1_scaffold_39_10
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

Not on your lists

comp(9894..10169)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CUT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX71665.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L3_133_000M1_scaffold_39_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(10162..10506)
DNA (345bp) protein (115aa)
Collagen alpha-1(I) chain (Alpha-1 type I collagen) n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AR01_9FIRM
Collagen alpha-1(I) chain (Alpha-1 type I collagen) {ECO:0000313|EMBL:CCX45393.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_39_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(10499..10741)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45394.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_39_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

10912..11343
DNA (432bp) protein (144aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Phosphodiesterase family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APU5_9FIRM
hypothetical protein
L3_133_000M1_scaffold_39_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11403..12215)
DNA (813bp) protein (271aa)
Serine/threonine protein kinase with PASTA sensor(S) n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1S0_9FIRM
Serine/threonine protein kinase with PASTA sensor(S) {ECO:0000313|EMBL:CCX45396.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
protein kinase family protein with PASTA domain
L3_133_000M1_scaffold_39_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

12324..13031
DNA (708bp) protein (236aa)
fabG; 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXE4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45407.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_39_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

comp(13089..14396)
DNA (1308bp) protein (436aa)
PSP1 C-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IFB2_9FIRM
PSP1 C-terminal domain protein {ECO:0000313|EMBL:CDB44046.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
hypothetical protein
L3_133_000M1_scaffold_39_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(14425..15216)
DNA (792bp) protein (264aa)
holB; putative DNA polymerase III subunit delta' (EC:2.7.7.7)
Putative DNA polymerase III delta' subunit n=2 Tax=root RepID=R5AX09_9FIRM
Putative DNA polymerase III delta' subunit {ECO:0000313|EMBL:CCX45267.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_39_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15344..15568)
DNA (225bp) protein (75aa)
Acyl carrier protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1D1_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
acyl carrier protein
L3_133_000M1_scaffold_39_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15595..16371)
DNA (777bp) protein (259aa)
R3H domain protein n=1 Tax=Firmicutes bacterium CAG:103 PF3_9FIRM">RepID=R5APF3_9FIRM
R3H domain protein {ECO:0000313|EMBL:CCX45265.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Jag protein homolog
L3_133_000M1_scaffold_39_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(16368..17627)
DNA (1260bp) protein (420aa)
Inner membrane protein OxaA n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATI3_9FIRM
Inner membrane protein OxaA {ECO:0000313|EMBL:CCX45264.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_39_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(17666..17884)
DNA (219bp) protein (73aa)
Putative membrane protein insertion efficiency factor n=2 Tax=root RepID=R5AQK4_9FIRM
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_39_22

Not on your lists

comp(17881..18234)
DNA (354bp) protein (118aa)
Riibonuclease P {ECO:0000313|EMBL:EKC70612.1}; EC=3.1.26.5 {ECO:0000313|EMBL:EKC70612.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rnpA; ribonuclease P protein component (EC:3.1.26.5)
Riibonuclease P n=1 Tax=human gut metagenome RepID=K1TBY3_9ZZZZ
L3_133_000M1_scaffold_39_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


comp(18347..18481)
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1C7_9FIRM
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
LSU ribosomal protein L34P
L3_133_000M1_scaffold_39_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(18609..19244)
DNA (636bp) protein (212aa)
Putative proton-coupled thiamine transporter YuaJ n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APE8_9FIRM
Putative proton-coupled thiamine transporter YuaJ {ECO:0000313|EMBL:CCX45260.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative thiamine transporter
L3_133_000M1_scaffold_39_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(19405..20406)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45259.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_39_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(20696..22252)
DNA (1557bp) protein (519aa)
Phosphonate ABC transporter permease protein PhnE n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQJ9_9FIRM
Phosphonate ABC transporter permease protein PhnE {ECO:0000313|EMBL:CCX45258.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
phosphonate ABC transporter, permease protein PhnE
L3_133_000M1_scaffold_39_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(22249..23007)
DNA (759bp) protein (253aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ABC-type phosphate/phosphonate transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX00_9FIRM
ABC-type phosphate/phosphonate transport system, ATPase component
L3_133_000M1_scaffold_39_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(23012..24055)
DNA (1044bp) protein (348aa)
ABC-type phosphate/phosphonate transport system periplasmic component n=2 Tax=root RepID=R5B1C3_9FIRM
ABC-type phosphate/phosphonate transport system periplasmic component {ECO:0000313|EMBL:CCX45256.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ABC-type phosphate/phosphonate transport system, periplasmic component
L3_133_000M1_scaffold_39_29

Not on your lists

comp(24531..25514)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1TF36_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC71767.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_133_000M1_scaffold_39_30

Not on your lists

25707..25943
DNA (237bp) protein (79aa)
Sporulation transcriptional regulator SpoIIID n=2 Tax=root RepID=R5APE2_9FIRM
Sporulation stage III, transcriptional regulator SpoIIID {ECO:0000313|EMBL:EKC81568.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Displaying items 1-30 of 96 in total

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