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L3_133_000M1_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_72_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..457
DNA (456bp) protein (152aa)
ABC transporter, permease protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUS3_BIFLN
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KEY23291.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_133_000M1_scaffold_72_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

649..2724
DNA (2076bp) protein (692aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Beta-galactosidase n=2 Tax=Bifidobacterium longum RepID=E8MH59_BIFL2
beta-galactosidase
L3_133_000M1_scaffold_72_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2849..3862
DNA (1014bp) protein (338aa)
Transcriptional regulator n=8 Tax=Bifidobacterium RepID=E8MS61_BIFL1
periplasmic-binding protein/LacI transcriptional regulator
RbsR-type transcription regulator/Ribose operon repressor {ECO:0000313|EMBL:ACD98371.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_133_000M1_scaffold_72_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3982..5682)
DNA (1701bp) protein (567aa)
Intracellular exo-alpha-(1->5)-L-arabinofuranosidase n=4 Tax=Bifidobacterium longum RepID=IABF_BIFLN
Alpha-L-arabinofuranosidase {ECO:0000313|EMBL:AIW43437.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
alpha-L-arabinofuranosidase
L3_133_000M1_scaffold_72_5
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5842..7194
DNA (1353bp) protein (451aa)
Bacterial extracellular solute-binding protein n=1 Tax=Bifidobacterium sp. 12_1_47BFAA RepID=E5XYC7_9BIFI
Bacterial extracellular solute-binding protein {ECO:0000313|EMBL:EFV37368.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
sugar ABC transporter substrate-binding protein
L3_133_000M1_scaffold_72_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7526..8869
DNA (1344bp) protein (448aa)
MalE-type ABC sugar transport system periplasmic component n=19 Tax=Bacteria RepID=B3DT99_BIFLD
sugar ABC transporter substrate-binding protein
MalE-type ABC sugar transport system periplasmic component {ECO:0000313|EMBL:ACD98368.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_133_000M1_scaffold_72_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8985..10406
DNA (1422bp) protein (474aa)
ABC transporter, solute-binding protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GUR6_BIFLN
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EEI81193.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
male-type abc sugar transport system periplasmic component
L3_133_000M1_scaffold_72_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10466..11236)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Type III pantothenate kinase n=12 Tax=Bifidobacterium RepID=E4QZX2_BIFLM
hypothetical protein
L3_133_000M1_scaffold_72_9
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11362..12981
DNA (1620bp) protein (540aa)
DDpA2 n=5 Tax=Bifidobacterium RepID=E4QZX1_BIFLM
Bacterial extracellular solute-binding protein, family 5 Middle {ECO:0000313|EMBL:EFV37364.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
ddpA2; ddpa2
L3_133_000M1_scaffold_72_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13046..14023
DNA (978bp) protein (326aa)
DppB3 n=1 Tax=Bifidobacterium longum subsp. longum (strain BBMN68) RepID=E4QZX0_BIFLM
dppB3; dppb3
ABC transporter permease {ECO:0000313|EMBL:KHD95941.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
L3_133_000M1_scaffold_72_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14020..14922
DNA (903bp) protein (301aa)
ABC-type dipeptide/oligopeptide/nickel transport systems permease component n=8 Tax=Bifidobacterium longum RepID=B3DT94_BIFLD
peptides ABC transporter permease
Permease protein of ABC transporter system for peptides {ECO:0000313|EMBL:ESV33066.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_133_000M1_scaffold_72_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14919..15710
DNA (792bp) protein (264aa)
Peptides ABC transporter ATP-binding component n=2 Tax=Bifidobacterium longum RepID=E8MH69_BIFL2
peptide ABC transporter ATP-binding protein
Diguanylate cyclase {ECO:0000313|EMBL:KEY23280.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_133_000M1_scaffold_72_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15703..16488
DNA (786bp) protein (262aa)
ABC-type oligopeptide transport system ATPase component n=7 Tax=Bifidobacterium RepID=B3DT92_BIFLD
peptide ABC transporter ATP-binding protein
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KEY32463.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_133_000M1_scaffold_72_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16972..18039
DNA (1068bp) protein (356aa)
Cystathionine beta-synthase n=5 Tax=Bifidobacterium longum RepID=Q8G564_BIFLO
cysK; cysk
Cysteine synthase {ECO:0000313|EMBL:ACD98360.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_133_000M1_scaffold_72_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18131..19315
DNA (1185bp) protein (395aa)
cystathionine gamma-lyase (EC:2.5.1.48 4.4.1.1)
Cys/Met metabolism PLP-dependent enzyme n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AVQ3_BIFLN
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:EIJ23196.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_133_000M1_scaffold_72_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19453..21177)
DNA (1725bp) protein (575aa)
L,D-transpeptidase catalytic domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AVP0_BIFLN
L,D-transpeptidase catalytic domain protein {ECO:0000313|EMBL:EIJ23183.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_133_000M1_scaffold_72_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21336..23291
DNA (1956bp) protein (652aa)
ATP-dependent DNA helicase RecQ n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AVP2_BIFLN
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:KHD95948.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
recQ; ATP-dependent DNA helicase RecQ
L3_133_000M1_scaffold_72_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23404..23898
DNA (495bp) protein (165aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
S-ribosylhomocysteine lyase n=12 Tax=Bifidobacterium RepID=LUXS_BIFLD
S-ribosylhomocysteinase
L3_133_000M1_scaffold_72_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24109..24594
DNA (486bp) protein (162aa)
Acetyltransferase (GNAT) domain protein n=1 Tax=Bifidobacterium longum subsp. longum 35B RepID=I3AVN9_BIFLN
histone acetyltransferase
Histone acetyltransferase {ECO:0000313|EMBL:AIW43452.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_133_000M1_scaffold_72_20
unknown

Not on your lists

24660..25046
DNA (387bp) protein (129aa)

This feature has no annotations

L3_133_000M1_scaffold_72_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24852..25991)
DNA (1140bp) protein (380aa)
PF11175 family protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AVP7_BIFLN
PF11175 family protein {ECO:0000313|EMBL:EIJ23190.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
hypothetical protein
L3_133_000M1_scaffold_72_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26126..26383)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3ASP2_BIFLN
transposase
Transposase {ECO:0000313|EMBL:AIW44606.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_133_000M1_scaffold_72_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26561..28021)
DNA (1461bp) protein (487aa)
Amino acid transport protein n=8 Tax=Bifidobacterium RepID=F8AS88_BIFLN
amino acid transport protein
Amino acid transporter {ECO:0000313|EMBL:EEQ54194.1}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L3_133_000M1_scaffold_72_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28216..29568
DNA (1353bp) protein (451aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|RuleBase:RU004247};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Alanine racemase n=1 Tax=Bifidobacterium longum subsp. infantis (strain 157F) RepID=E8MS79_BIFL1
alanine racemase
L3_133_000M1_scaffold_72_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29863..31149
DNA (1287bp) protein (429aa)
Deoxyguanosinetriphosphate triphosphohydrolase n=2 Tax=Bifidobacterium longum RepID=E8MS80_BIFL1
Deoxyguanosinetriphosphate triphosphohydrolase {ECO:0000313|EMBL:KHD95953.1}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
deoxyguanosinetriphosphate triphosphohydrolase
L3_133_000M1_scaffold_72_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31313..33421
DNA (2109bp) protein (703aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051044}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|SAAS:SAAS00051045};; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
DNA primase n=5 Tax=Bifidobacterium longum RepID=C2GUP7_BIFLN
dnaG; dnag
L3_133_000M1_scaffold_72_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33616..34242
DNA (627bp) protein (209aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=C2GUP6_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIW44607.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_133_000M1_scaffold_72_28
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34239..34634
DNA (396bp) protein (132aa)
DNA-binding family protein n=4 Tax=Bifidobacterium longum RepID=C2GUP5_BIFLN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:BAP83169.1}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
XRE family transcriptional regulator
L3_133_000M1_scaffold_72_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34850..35725
DNA (876bp) protein (292aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000255|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000255|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000255|HAMAP-Rule:MF_01824}; TaxID=391904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088; / JCM 1222 / NCTC 11817 / S12).;"
Pyridoxal biosynthesis lyase PdxS n=18 Tax=Bifidobacterium RepID=PDXS_BIFLO
pyridoxal 5'-phosphate synthase, synthase subunit Pdx1
L3_133_000M1_scaffold_72_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35811..36449
DNA (639bp) protein (213aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase glutaminase subunit {ECO:0000256|HAMAP-Rule:MF_01615}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
Glutamine amidotransferase subunit PdxT n=3 Tax=Bifidobacterium longum RepID=B3DT79_BIFLD
SNO glutamine amidotransferase
Displaying items 1-30 of 76 in total

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