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L3_133_000M1_scaffold_73

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_73_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1027
DNA (1026bp) protein (342aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate C-acetyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NPE8_9FIRM
Formate C-acetyltransferase {ECO:0000313|EMBL:CCY98822.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_73_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1036..1785
DNA (750bp) protein (250aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
pyruvate formate-lyase 1-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4X1_9FIRM
L3_133_000M1_scaffold_73_3
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1939..4032
DNA (2094bp) protein (698aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium hallii CAG:12 RepID=R6G0G4_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:CDB18978.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
diguanylate cyclase (GGDEF) domain
L3_133_000M1_scaffold_73_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4087..4827)
DNA (741bp) protein (247aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIF3_9FIRM
L3_133_000M1_scaffold_73_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4970..5389
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96893.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_73_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5438..6985
DNA (1548bp) protein (516aa)
Peptidoglycan-binding LysM n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4M5_9FIRM
Peptidoglycan-binding LysM {ECO:0000313|EMBL:CCY96894.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
LysM domain.
L3_133_000M1_scaffold_73_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7100..7981
DNA (882bp) protein (294aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYQ4_9FIRM
L3_133_000M1_scaffold_73_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7971..8672
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96896.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
transcriptional regulator, GntR family
L3_133_000M1_scaffold_73_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8641..10251
DNA (1611bp) protein (537aa)
Bacillus/Clostridium GerA spore germination protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIF8_9FIRM
Bacillus/Clostridium GerA spore germination protein {ECO:0000313|EMBL:CCY96897.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Bacillus/Clostridium GerA spore germination protein.
L3_133_000M1_scaffold_73_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10248..11933
DNA (1686bp) protein (562aa)
Spore germination protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZK4_9FIRM
Spore germination protein {ECO:0000313|EMBL:CCY96898.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Spore germination protein.
L3_133_000M1_scaffold_73_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12040..12285
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4N0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96899.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_73_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12345..13166
DNA (822bp) protein (274aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYQ9_9FIRM
L3_133_000M1_scaffold_73_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13176..13622
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHT8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96901.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_73_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13684..14124)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96902.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Protein of unknown function (DUF1628).
L3_133_000M1_scaffold_73_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14367..15878
DNA (1512bp) protein (504aa)
Polysaccharide deacetylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZL0_9FIRM
Polysaccharide deacetylase {ECO:0000313|EMBL:CCY96903.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Polysaccharide deacetylase.
L3_133_000M1_scaffold_73_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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15930..17456
DNA (1527bp) protein (509aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96904.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Polysaccharide deacetylase.
L3_133_000M1_scaffold_73_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17557..18885
DNA (1329bp) protein (443aa)
Trigger factor n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYR6_9FIRM
Trigger factor {ECO:0000256|RuleBase:RU003914}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
trigger factor
L3_133_000M1_scaffold_73_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19091..20596
DNA (1506bp) protein (502aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHU2_9FIRM
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CCY96906.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted xylanase/chitin deacetylase
L3_133_000M1_scaffold_73_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20808..22694
DNA (1887bp) protein (629aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIG8_9FIRM
L3_133_000M1_scaffold_73_20
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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22934..25534
DNA (2601bp) protein (867aa)
ATPase, P-type (transporting), HAD superfamily, subfamily IC (EC:3.6.3.8)
Putative calcium-translocating P-type ATPase PMCA-type n=3 Tax=Blautia RepID=R5C0B5_9FIRM
Putative calcium-translocating P-type ATPase PMCA-type {ECO:0000313|EMBL:CCX58337.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_133_000M1_scaffold_73_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25678..27303)
DNA (1626bp) protein (542aa)
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYS2_9FIRM
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:CCY96910.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Bacterial capsule synthesis protein PGA_cap.
L3_133_000M1_scaffold_73_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28407..28820
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96911.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
conserved hypothetical protein TIGR00051
L3_133_000M1_scaffold_73_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28826..29107
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96912.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_73_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29137..30909)
DNA (1773bp) protein (591aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZM1_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCY96913.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_73_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31230..32168
DNA (939bp) protein (313aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4P9_9FIRM
L3_133_000M1_scaffold_73_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32155..33189
DNA (1035bp) protein (345aa)
Transcriptional regulators n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYS7_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CCY96915.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulators
L3_133_000M1_scaffold_73_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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33433..34455
DNA (1023bp) protein (341aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHV3_9FIRM
Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB {ECO:0000313|EMBL:CCY96916.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_73_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34560..35375
DNA (816bp) protein (272aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5NII0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96917.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_133_000M1_scaffold_73_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35372..36202
DNA (831bp) protein (277aa)
PTS system IID component Man family (TC 4.A.6) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZM6_9FIRM
PTS system IID component Man family (TC 4.A.6) {ECO:0000313|EMBL:CCY96918.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
PTS system IID component, Man family (TC 4.A.6)
L3_133_000M1_scaffold_73_30
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36402..38081
DNA (1680bp) protein (560aa)
Glycosidases {ECO:0000313|EMBL:CBL19504.1}; EC=3.2.1.10 {ECO:0000313|EMBL:CBL19504.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Glycosidases (EC:3.2.1.10)
Glycosidases n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI43_9FIRM
Displaying items 1-30 of 82 in total

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