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L3_133_000M1_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_83_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..206)
DNA (204bp) protein (68aa)
O-acetylhomoserine (Thiol)-lyase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0Z6_BIFAA
O-acetylhomoserine (thiol)-lyase
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:BAF39379.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_133_000M1_scaffold_83_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

537..1412
DNA (876bp) protein (292aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Possible pyridoxine kinase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0Z5_BIFAA
putative pyridoxine kinase
L3_133_000M1_scaffold_83_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1582..2034
DNA (453bp) protein (151aa)
UPF0102 protein BAD_0596 n=3 Tax=Bifidobacterium RepID=Y596_BIFAA
hypothetical protein
UPF0102 protein BAD_0596 {ECO:0000255|HAMAP-Rule:MF_00048}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_133_000M1_scaffold_83_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2034..3563
DNA (1530bp) protein (510aa)
Mg chelatase-like protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A501_BIFAD
hypothetical protein
ATPase AAA {ECO:0000313|EMBL:KIM01441.1}; Mg chelatase-like protein {ECO:0000313|EMBL:AII76032.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05613.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3560..4864
DNA (1305bp) protein (435aa)
Putative DNA protecting protein DprA n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A500_BIFAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII76031.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_6
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4957..6789
DNA (1833bp) protein (611aa)
Succinate dehydrogenase flavoprotein subunit n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H3A9_9BIFI
succinate dehydrogenase flavoprotein subunit
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AJE05611.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6848..7765
DNA (918bp) protein (306aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=2 Tax=root RepID=A7A4Z8_BIFAD
putative iron sulfur protein associated with succinate dehydrogenase
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EDN83981.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_133_000M1_scaffold_83_8
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7767..8438
DNA (672bp) protein (224aa)
O-methyltransferase n=3 Tax=root RepID=A7A4Z7_BIFAD
putative methyltransferase
O-methyltransferase {ECO:0000313|EMBL:CCY19294.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_133_000M1_scaffold_83_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8534..9895)
DNA (1362bp) protein (454aa)
Na(+)/H(+) antiporter NhaA n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPD7_9BIFI
Kef-type K transport systems membranecomponent
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_10
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10364..11677)
DNA (1314bp) protein (438aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z4_BIFAD
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ATP-dependent protease ATP-binding subunit ClpX
L3_133_000M1_scaffold_83_11
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11782..12483)
DNA (702bp) protein (234aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z3_BIFAD
ATP-dependent Clp protease proteolytic subunit 1
L3_133_000M1_scaffold_83_12
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12486..13106)
DNA (621bp) protein (207aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
ATP-dependent Clp protease proteolytic subunit n=5 Tax=Bifidobacterium RepID=A1A0Y5_BIFAA
clp1; ATP-dependent Clp protease proteolytic subunit 2
L3_133_000M1_scaffold_83_13
Bifidobacterium ruminantium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13196..14749)
DNA (1554bp) protein (518aa)
Lincomycin resistance protein LmrB n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Z1_BIFAD
MFS superfamily transporter {ECO:0000313|EMBL:KFI89407.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;"
efflux-type transporter
L3_133_000M1_scaffold_83_14
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15179..16207)
DNA (1029bp) protein (343aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BVG1_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16580.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
inner-membrane translocator
L3_133_000M1_scaffold_83_15
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16204..17277)
DNA (1074bp) protein (358aa)
Branched-chain amino acid ABC transporter, permease protein n=2 Tax=Bifidobacterium RepID=C0BVG0_9BIFI
ABC transporter permease component {ECO:0000313|EMBL:BAR03329.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
araH1; arah1
L3_133_000M1_scaffold_83_16
Bifidobacterium pseudocatenulatum CAG:263, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17277..18815)
DNA (1539bp) protein (513aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium RepID=C0BVF9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CDC16582.1}; TaxID=1263060 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium pseudocatenulatum CAG:263.;"
sugar ABC transporter ATP-binding protein
L3_133_000M1_scaffold_83_17
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18954..19940)
DNA (987bp) protein (329aa)
Sugar-binding domain protein n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BVF8_9BIFI
ABC transporter substrate binding component {ECO:0000313|EMBL:BAR03327.1}; Sugar-binding domain protein {ECO:0000313|EMBL:EEG69949.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
rbsB; rbsb
L3_133_000M1_scaffold_83_18
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20158..21861)
DNA (1704bp) protein (568aa)
Putative lipoprotein LpqB n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BVF7_9BIFI
Putative lipoprotein LpqB {ECO:0000313|EMBL:EEG69948.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR03326.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
hypothetical protein
L3_133_000M1_scaffold_83_19
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21894..23486)
DNA (1593bp) protein (531aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
Uncharacterized protein n=1 Tax=Bifidobacterium pseudocatenulatum CAG:263 RepID=R6NWV9_9BIFI
two-component sensor kinase
L3_133_000M1_scaffold_83_20
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23583..24317)
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium RepID=C0BVF5_9BIFI
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG69946.1}; Two-component response regulator {ECO:0000313|EMBL:BAR03324.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
winged helix family two component transcriptional regulator
L3_133_000M1_scaffold_83_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24448..25827)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0Y3_BIFAA
recombination factor protein RarA
ATPase, AAA family {ECO:0000313|EMBL:EDN83973.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_133_000M1_scaffold_83_22
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25875..28469
DNA (2595bp) protein (865aa)
DEAD/DEAH box helicase {ECO:0000313|EMBL:KFI96764.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KFI96764.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Probable DEAD box-like helicase n=1 Tax=Bifidobacterium adolescentis CAG:119 PF5_9BIFI">RepID=R5GPF5_9BIFI
DEAD/DEAH box helicase
L3_133_000M1_scaffold_83_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28451..29452)
DNA (1002bp) protein (334aa)
Polyphosphate:nucleotide phosphotransferase, PPK2 family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4Y8_BIFAD
Polyphosphate kinase {ECO:0000313|EMBL:KIM01921.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_133_000M1_scaffold_83_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29571..30698)
DNA (1128bp) protein (376aa)
Permease protein of ABC transporter for glutamate n=2 Tax=Bifidobacterium adolescentis RepID=A1A0Y0_BIFAA
permease protein of ABC transporter for glutamate
Permease protein of ABC transporter for glutamate {ECO:0000313|EMBL:BAF39363.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_133_000M1_scaffold_83_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30705..31382)
DNA (678bp) protein (226aa)
Permease protein of ABC transporter for glutamate n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0X9_BIFAA
gluC; glutamate ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:KIM01923.1}; Permease protein of ABC transporter for glutamate {ECO:0000313|EMBL:AII76018.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31382..32224)
DNA (843bp) protein (281aa)
Glutamate-binding protein of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A0X8_BIFAA
glutamate-binding protein of ABC transporter system
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EDN83968.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_133_000M1_scaffold_83_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32261..33058)
DNA (798bp) protein (266aa)
ATP-binding protein of ABC transporter for glutamate n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0X7_BIFAA
ATP-binding protein of ABC transporter for glutamate
ATP-binding protein of ABC transporter for glutamate {ECO:0000313|EMBL:AJE05597.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_83_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33193..33933)
DNA (741bp) protein (247aa)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium adolescentis RepID=A7A4Y3_BIFAD
putative amino acid ABC transporter
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN83966.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_133_000M1_scaffold_83_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33930..35480)
DNA (1551bp) protein (517aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium adolescentis RepID=A7A4Y2_BIFAD
glutamine ABC transporter (binding and transport protein)-like protein
Glutamine ABC transporter {ECO:0000313|EMBL:KFI96757.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_133_000M1_scaffold_83_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(35629..37428)
DNA (1800bp) protein (600aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=3 Tax=root RepID=A1A0X4_BIFAA
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AII76013.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Displaying items 1-30 of 71 in total

View Taxonomy