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L3_133_000M1_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_84_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..466
DNA (465bp) protein (155aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LXA2_9FIRM
L3_133_000M1_scaffold_84_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

653..1849
DNA (1197bp) protein (399aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZM4_9FIRM
L3_133_000M1_scaffold_84_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1894..2643
DNA (750bp) protein (250aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5L7_9FIRM
L3_133_000M1_scaffold_84_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2495..2935)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0I3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97208.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_84_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2874..3146)
DNA (273bp) protein (91aa)
Predicted transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJE1_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCY97207.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted transcriptional regulator
L3_133_000M1_scaffold_84_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3248..3469
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97206.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_84_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3598..4716
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZL9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97205.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Protein of unknown function (DUF2974).
L3_133_000M1_scaffold_84_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4771..6066
DNA (1296bp) protein (432aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5L1_9FIRM
L3_133_000M1_scaffold_84_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6206..7747
DNA (1542bp) protein (514aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0H8_9FIRM
L3_133_000M1_scaffold_84_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7994..9346
DNA (1353bp) protein (451aa)
Putative efflux protein MATE family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJD6_9FIRM
Putative efflux protein MATE family {ECO:0000313|EMBL:CCY97202.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
putative efflux protein, MATE family
L3_133_000M1_scaffold_84_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9500..11260
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97201.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_84_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11342..11641
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97200.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_84_13
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11810..13192)
DNA (1383bp) protein (461aa)
MATE efflux family protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EP15_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:ERI96517.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
putative efflux protein, MATE family
L3_133_000M1_scaffold_84_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13189..13809)
DNA (621bp) protein (207aa)
haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0H3_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 1 with third motif having Dx(3-4)D or Dx(3-4)E {ECO:0000313|EMBL:CCY97198.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_84_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13959..14639
DNA (681bp) protein (227aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJD2_9FIRM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
sugar fermentation stimulation protein
L3_133_000M1_scaffold_84_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14652..15707
DNA (1056bp) protein (352aa)
A/G-specific adenine glycosylase (EC:3.2.2.-)
A/G-specific adenine glycosylase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIM4_9FIRM
A/G-specific adenine glycosylase {ECO:0000313|EMBL:CCY97196.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_84_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15704..16720
DNA (1017bp) protein (339aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZK7_9FIRM
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:CCY97195.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Glycosyltransferases involved in cell wall biogenesis
L3_133_000M1_scaffold_84_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16758..17447)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97194.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
PAP2 superfamily.
L3_133_000M1_scaffold_84_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17532..18464)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0G8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97193.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_133_000M1_scaffold_84_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18644..19318
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJC7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY97192.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000M1_scaffold_84_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19470..21662
DNA (2193bp) protein (731aa)
DNA topoisomerase 3 {ECO:0000256|HAMAP-Rule:MF_00953}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00953, ECO:0000256|SAAS:SAAS00046608};; DNA topoisomerase III {ECO:0000256|HAMAP-Rule:MF_00953}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA topoisomerase III, bacteria and conjugative plasmid (EC:5.99.1.2)
DNA topoisomerase 3 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIM1_9FIRM
L3_133_000M1_scaffold_84_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21768..22148
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97190.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_84_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22148..22819
DNA (672bp) protein (224aa)
Uncharacterised protein family (UPF0153) n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5J8_9FIRM
Uncharacterised protein family (UPF0153) {ECO:0000313|EMBL:CCY97189.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterised protein family (UPF0153).
L3_133_000M1_scaffold_84_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22899..23798
DNA (900bp) protein (300aa)
Transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N0G4_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:CCY97188.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulator
L3_133_000M1_scaffold_84_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24282..25070
DNA (789bp) protein (263aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJC2_9FIRM
L3_133_000M1_scaffold_84_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25220..26128)
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIL8_9FIRM
LysR family transcriptional regulator {ECO:0000313|EMBL:CCY97186.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
LysR family transcriptional regulator
L3_133_000M1_scaffold_84_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26412..27251
DNA (840bp) protein (280aa)
Xylose isomerase-like TIM barrel n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZJ9_9FIRM
Xylose isomerase-like TIM barrel {ECO:0000313|EMBL:CCY97185.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Xylose isomerase-like TIM barrel.
L3_133_000M1_scaffold_84_28
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27270..29195
DNA (1926bp) protein (642aa)
NADH:flavin oxidoreductases, Old Yellow Enzyme family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LMZ0_9FIRM
NADH:flavin oxidoreductases, Old Yellow Enzyme family
Putative NADH oxidase {ECO:0000313|EMBL:ERI96533.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_133_000M1_scaffold_84_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29356..30237
DNA (882bp) protein (294aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NJB6_9FIRM
L3_133_000M1_scaffold_84_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30243..31442
DNA (1200bp) protein (400aa)
Arabinose efflux permease n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIL4_9FIRM
Arabinose efflux permease {ECO:0000313|EMBL:CCY97181.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Arabinose efflux permease
Displaying items 1-30 of 75 in total

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