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L3_133_000M1_scaffold_122

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_122_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..505)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99935.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_133_000M1_scaffold_122_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(582..1274)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J159_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42766.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L3_133_000M1_scaffold_122_3
Syntrophobotulus glycolicus, Syntrophobotulus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1381..1956)
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI000363D5C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY54456.1}; TaxID=645991 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Syntrophobotulus.;" source="Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR).;"
L3_133_000M1_scaffold_122_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2776..3111
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBS0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG30981.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_133_000M1_scaffold_122_5
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3542..3856)
DNA (315bp) protein (105aa)
Transcriptional regulator, HxlR family n=2 Tax=Clostridium RepID=D4CEJ4_9CLOT
Transcriptional regulator HxlR family {ECO:0000313|EMBL:CCY82696.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
transcriptional regulator, MarR family
L3_133_000M1_scaffold_122_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3993..4388
DNA (396bp) protein (132aa)
Uncharacterized conserved protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JKR5_9FIRM
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:CBK94212.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_133_000M1_scaffold_122_7
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4468..5247
DNA (780bp) protein (260aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=S2Z733_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59874.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1
L3_133_000M1_scaffold_122_8
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5192..6061
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RRW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC76119.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_133_000M1_scaffold_122_9
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6073..6264
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KJZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS46561.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_133_000M1_scaffold_122_10
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6729..7199
DNA (471bp) protein (157aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L8I9_9FIRM
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:CBL15934.1}; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
L3_133_000M1_scaffold_122_11
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7777..8010
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Coprococcus sp. ART55/1 RepID=D5HHR4_9FIRM
hypothetical protein
DNA binding domain, excisionase family {ECO:0000313|EMBL:EEG95423.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_133_000M1_scaffold_122_12
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8011..9288
DNA (1278bp) protein (426aa)
Phage integrase n=2 Tax=Dehalobacter RepID=K4KYX4_9FIRM
phage integrase
Phage integrase {ECO:0000313|EMBL:AFV04247.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. CF.;"
L3_133_000M1_scaffold_122_13
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9673..10884)
DNA (1212bp) protein (404aa)
Site-specific recombinase, phage integrase family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ12_9CLOT
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDO59790.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
Site-specific recombinase XerD
L3_133_000M1_scaffold_122_14
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11008..11514)
DNA (507bp) protein (169aa)
ParB-like protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DE94_CLOS4
ParB-like protein {ECO:0000313|EMBL:ERJ01155.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ParB-like partition proteins
L3_133_000M1_scaffold_122_15
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11511..11930)
DNA (420bp) protein (140aa)
ParB-like protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DE94_CLOS4
ParB-like protein {ECO:0000313|EMBL:ERJ01155.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ParB-like partition proteins
L3_133_000M1_scaffold_122_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11945..12298)
DNA (354bp) protein (118aa)
Bacterial mobilization protein MobC n=1 Tax=Clostridium leptum CAG:27 RepID=R6NH79_9CLOT
Bacterial mobilization protein MobC {ECO:0000313|EMBL:CDC05546.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
MocB-like protein
L3_133_000M1_scaffold_122_17
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12428..12688)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ09_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59787.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_133_000M1_scaffold_122_18
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12685..12906)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VZ08_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59786.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_133_000M1_scaffold_122_19
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12971..13987)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F7A1_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERJ01152.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
hypothetical protein
L3_133_000M1_scaffold_122_20
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14115..14471)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N0Q9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05538.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
hypothetical protein
L3_133_000M1_scaffold_122_21
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15539..15727
DNA (189bp) protein (63aa)
DNA binding domain, excisionase family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ8_9CLOT
DNA binding domain, excisionase family {ECO:0000313|EMBL:EDO59776.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
excisionase family DNA binding domain-containing protein
L3_133_000M1_scaffold_122_22
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15740..15946
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO59775.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_133_000M1_scaffold_122_23
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15950..16111
DNA (162bp) protein (54aa)
Fic family protein n=1 Tax=Eubacterium siraeum DSM 15702 RepID=B0MMJ2_9FIRM
Fic family protein {ECO:0000313|EMBL:EDS01076.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
Protein involved in cell division
L3_133_000M1_scaffold_122_24
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16108..17013
DNA (906bp) protein (302aa)
Restriction endonuclease n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3R3_9CLOT
Restriction endonuclease {ECO:0000313|EMBL:CCY67677.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Restriction endonuclease
L3_133_000M1_scaffold_122_25
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17078..20314
DNA (3237bp) protein (1079aa)
Type I site-specific deoxyribonuclease (EC:3.1.21.3)
Helicase C-terminal domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ5_9CLOT
Helicase C-terminal domain protein {ECO:0000313|EMBL:EDO59773.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L3_133_000M1_scaffold_122_26
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20314..21837
DNA (1524bp) protein (508aa)
N-6 DNA Methylase n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ4_9CLOT
N-6 DNA Methylase {ECO:0000313|EMBL:EDO59772.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
type I restriction-modification system, M subunit
L3_133_000M1_scaffold_122_27
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21837..23177
DNA (1341bp) protein (447aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYZ3_9CLOT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EDO59771.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
hypothetical protein
L3_133_000M1_scaffold_122_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

23196..24077
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QW99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33055.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_133_000M1_scaffold_122_29
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24196..27504
DNA (3309bp) protein (1103aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K2Z1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EWM53165.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
helicase
L3_133_000M1_scaffold_122_30
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27555..27929)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N3C5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC05520.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
Hypothetical protein
Displaying items 1-30 of 67 in total

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