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L3_133_000M1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_183_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(193..1515)
DNA (1323bp) protein (441aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase {ECO:0000313|EMBL:CBL20743.1}; EC=3.2.1.51 {ECO:0000313|EMBL:CBL20743.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Alpha-L-fucosidase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLN2_9FIRM
L3_133_000M1_scaffold_183_2
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1622..3088)
DNA (1467bp) protein (489aa)
Alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase n=1 Tax=Blautia sp. KLE 1732 RepID=U2EV89_9FIRM
Alpha-L-fucosidase {ECO:0000313|EMBL:ERI97011.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_133_000M1_scaffold_183_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3271..3984)
DNA (714bp) protein (238aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N091_9FIRM
L3_133_000M1_scaffold_183_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4007..4636)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DKS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97013.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_183_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4652..5845)
DNA (1194bp) protein (398aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N464_9FIRM
gyrA suspected. See adjacent gene [L3_133_000M1_scaffold_183_6].
L3_133_000M1_scaffold_183_6
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5802..7064)
DNA (1263bp) protein (421aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Blautia sp. KLE 1732 RepID=U2D2H6_9FIRM
L3_133_000M1_scaffold_183_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7079..9004)
DNA (1926bp) protein (642aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNM2_9FIRM
L3_133_000M1_scaffold_183_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9342..9974)
DNA (633bp) protein (211aa)
Putative 60S ribosomal subunit assembly/export protein LOC1 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMH7_9FIRM
Putative 60S ribosomal subunit assembly/export protein LOC1 {ECO:0000313|EMBL:CCY98526.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_183_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10330..11193)
DNA (864bp) protein (288aa)
S-adenosylmethionine-dependent methyltransferase, YraL family (Fragment) n=1 Tax=Blautia sp. KLE 1732 RepID=U2E596_9FIRM
S-adenosylmethionine-dependent methyltransferase, YraL family {ECO:0000313|EMBL:ERI89392.1}; Flags: Fragment;; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
conserved hypothetical protein TIGR00096
L3_133_000M1_scaffold_183_10
unknown

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11238..11708
DNA (471bp) protein (157aa)

This feature has no annotations

L3_133_000M1_scaffold_183_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12013..12753)
DNA (741bp) protein (247aa)
Predicted O-methyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N986_9FIRM
Predicted O-methyltransferase {ECO:0000313|EMBL:CCY98424.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted O-methyltransferase
L3_133_000M1_scaffold_183_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12743..13642)
DNA (900bp) protein (300aa)
Uncharacterized homolog of PSP1 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N360_9FIRM
Uncharacterized homolog of PSP1 {ECO:0000313|EMBL:CCY98425.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterized homolog of PSP1
L3_133_000M1_scaffold_183_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13644..14633)
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NM62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98426.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_183_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14735..15322)
DNA (588bp) protein (196aa)
Guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NN64_9FIRM
Guanylate kinase {ECO:0000313|EMBL:CCY98427.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_183_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15470..16909)
DNA (1440bp) protein (480aa)
Arginine/lysine/ornithine decarboxylases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3S8_9FIRM
Arginine/lysine/ornithine decarboxylases {ECO:0000313|EMBL:CCY98428.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Arginine/lysine/ornithine decarboxylases
L3_133_000M1_scaffold_183_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16978..17514)
DNA (537bp) protein (179aa)
Uncharacterized protein conserved in cyanobacteria n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N993_9FIRM
Uncharacterized protein conserved in cyanobacteria {ECO:0000313|EMBL:CCY98429.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterized protein conserved in cyanobacteria
L3_133_000M1_scaffold_183_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17617..18306)
DNA (690bp) protein (230aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N365_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CCY98430.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000M1_scaffold_183_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18299..19456)
DNA (1158bp) protein (386aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Sensor histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NM69_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./HAMP domain.
L3_133_000M1_scaffold_183_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19620..20822)
DNA (1203bp) protein (401aa)
S-adenosylmethionine synthase {ECO:0000256|RuleBase:RU000541}; EC=2.5.1.6 {ECO:0000256|RuleBase:RU000541};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Blautia sp. KLE 1732 RepID=U2DMV3_9FIRM
L3_133_000M1_scaffold_183_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21252..22841)
DNA (1590bp) protein (530aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98433.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_183_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22825..23733)
DNA (909bp) protein (303aa)
LPXTG-site transpeptidase (Sortase) family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N998_9FIRM
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CCY98434.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
LPXTG-site transpeptidase (sortase) family protein
L3_133_000M1_scaffold_183_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23737..24597)
DNA (861bp) protein (287aa)
LPXTG-site transpeptidase (Sortase) family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N373_9FIRM
LPXTG-site transpeptidase (Sortase) family protein {ECO:0000313|EMBL:CCY98435.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
LPXTG-site transpeptidase (sortase) family protein
L3_133_000M1_scaffold_183_23
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24733..26115)
DNA (1383bp) protein (461aa)
Cna protein B-type domain./Gram positive anchor n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLL6_9FIRM
Cna protein B-type domain./Gram positive anchor.
Cna protein B-type domain./Gram positive anchor {ECO:0000313|EMBL:CBL20727.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_183_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26186..31867)
DNA (5682bp) protein (1894aa)
Fibro-slime domain n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LLL5_9FIRM
Fibro-slime domain {ECO:0000313|EMBL:CBL20726.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
fibro-slime domain
L3_133_000M1_scaffold_183_25
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32230..33231)
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GTP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE30495.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
hypothetical protein
L3_133_000M1_scaffold_183_26
unknown

Not on your lists

comp(33224..33370)
DNA (147bp) protein (49aa)

This feature has no annotations

L3_133_000M1_scaffold_183_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34084..35376)
DNA (1293bp) protein (431aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N8Y8_9FIRM
L3_133_000M1_scaffold_183_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35506..36012)
DNA (507bp) protein (169aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3I2_9FIRM
L3_133_000M1_scaffold_183_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36080..36661)
DNA (582bp) protein (194aa)
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMW7_9FIRM
Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family {ECO:0000313|EMBL:CCY98342.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
L3_133_000M1_scaffold_183_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36675..38345)
DNA (1671bp) protein (557aa)
Inorganic pyrophosphatase/exopolyphosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase/exopolyphosphatase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NLX0_9FIRM
Inorganic pyrophosphatase/exopolyphosphatase {ECO:0000313|EMBL:CCY98341.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Displaying items 1-30 of 58 in total

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