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L3_133_000M1_scaffold_211

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Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_211_1
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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210..587
DNA (378bp) protein (126aa)
Predicted protein n=12 Tax=Bacteria RepID=C9CCW9_ENTFC
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI81606.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
putative Xre family DNA-binding protein
L3_133_000M1_scaffold_211_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(750..1226)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGN8_9FIRM
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:ERI81605.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000M1_scaffold_211_3
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1278..1727)
DNA (450bp) protein (150aa)
DNA-binding helix-turn-helix protein n=12 Tax=Bacteria RepID=E8LH37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOQ38702.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
putative transcriptional regulator
L3_133_000M1_scaffold_211_4
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2013..2525
DNA (513bp) protein (171aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1ALC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46332.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_133_000M1_scaffold_211_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2788..3093
DNA (306bp) protein (102aa)
Predicted transcriptional regulators n=11 Tax=Firmicutes RepID=D4K4P1_9FIRM
Predicted transcriptional regulators
Predicted transcriptional regulators {ECO:0000313|EMBL:CBK98484.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_133_000M1_scaffold_211_6
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3608..4015
DNA (408bp) protein (136aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
mRNA interferase n=11 Tax=root RepID=E8LH40_9FIRM
Growth inhibitor
L3_133_000M1_scaffold_211_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4022..4249
DNA (228bp) protein (76aa)
DNA binding domain, excisionase family n=12 Tax=root RepID=D4K4P0_9FIRM
DNA binding domain, excisionase family
Excisionase family DNA binding domain-containing protein {ECO:0000313|EMBL:ENZ19582.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
L3_133_000M1_scaffold_211_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4305..4928
DNA (624bp) protein (208aa)
DNA binding domain, excisionase family n=12 Tax=root RepID=D4K4N9_9FIRM
DNA binding domain, excisionase family
DNA binding domain, excisionase family {ECO:0000313|EMBL:CBK98482.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_133_000M1_scaffold_211_9

Not on your lists

4933..5739
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALD2_9FIRM
Phage integrase family site-specific recombinase {ECO:0000313|EMBL:EKC75920.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_211_10
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5745..6230
DNA (486bp) protein (162aa)
Site-specific recombinase, phage integrase family n=11 Tax=root RepID=E8LH43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOQ38708.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Site-specific recombinase XerD
L3_133_000M1_scaffold_211_11
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6316..6621
DNA (306bp) protein (102aa)
Predicted protein n=11 Tax=Firmicutes RepID=C9CCX8_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOQ38709.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
L3_133_000M1_scaffold_211_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7049..7759
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YMD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09434.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative two-component response regulator
L3_133_000M1_scaffold_211_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7756..9096
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2P4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09435.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
putative two-component histidine kinase
L3_133_000M1_scaffold_211_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9161..9619
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X275_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09436.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_211_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9859..10689
DNA (831bp) protein (277aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YNQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47896.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_211_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10845..11831
DNA (987bp) protein (329aa)
Oxidoreductase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YBX6_9CLOT
Oxidoreductase {ECO:0000313|EMBL:ENZ09438.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
oxidoreductase domain-containing protein
L3_133_000M1_scaffold_211_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11977..13173
DNA (1197bp) protein (399aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
isocitrate dehydrogenase, NADP-dependent, eukaryotic type (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] n=4 Tax=Clostridium RepID=N9YME0_9CLOT
L3_133_000M1_scaffold_211_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13277..14224)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2P7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09440.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
L3_133_000M1_scaffold_211_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14241..14474)
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X281_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47900.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_211_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14488..14916)
DNA (429bp) protein (143aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YNR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09442.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
D-ribose pyranase
L3_133_000M1_scaffold_211_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14913..16397)
DNA (1485bp) protein (495aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.17)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YBY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09443.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_211_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16410..17450)
DNA (1041bp) protein (347aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YME4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47903.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_211_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17472..18458)
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2Q2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09445.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter permease
L3_133_000M1_scaffold_211_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18448..19980)
DNA (1533bp) protein (511aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X286_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47905.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_211_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20099..21322)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YNR6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09447.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
periplasmic binding protein/LacI transcriptional regulator
L3_133_000M1_scaffold_211_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21349..22200)
DNA (852bp) protein (284aa)
ketose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=3 Tax=Clostridium RepID=N9YBY7_9CLOT
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:ENZ47907.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_211_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22436..24268)
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YME8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09449.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
sugar ABC transporter ATPase
L3_133_000M1_scaffold_211_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24294..24887)
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X2Q7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47909.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
response regulator with antiterminator output domain
L3_133_000M1_scaffold_211_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25063..25305
DNA (243bp) protein (81aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9X291_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ47910.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_211_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25494..26669
DNA (1176bp) protein (392aa)
sorbitol dehydrogenase (EC:1.1.1.14)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YNS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09452.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Displaying items 1-30 of 72 in total

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