ggKbase home page

L3_133_000M1_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_214_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..283
DNA (282bp) protein (94aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CII4_9FIRM
L3_133_000M1_scaffold_214_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

542..1666
DNA (1125bp) protein (375aa)
Putative cysteine desulfurase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54915.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
iscS; cysteine desulfurase
L3_133_000M1_scaffold_214_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1683..3059
DNA (1377bp) protein (459aa)
MATE efflux family protein n=2 Tax=Clostridiales RepID=H1CII1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54914.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
MatE efflux family protein
L3_133_000M1_scaffold_214_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3130..3597)
DNA (468bp) protein (156aa)
Acetyltransferase, GNAT family n=2 Tax=Clostridiales RepID=G9YTC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29215.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
N-acetyltransferase GCN5
L3_133_000M1_scaffold_214_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3805..4857
DNA (1053bp) protein (351aa)
Heat-inducible transcription repressor hrcA n=2 Tax=Clostridiales RepID=H1CIH9_9FIRM
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hrcA; heat-inducible transcription repressor HrcA
L3_133_000M1_scaffold_214_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4865..5416
DNA (552bp) protein (184aa)
Protein GrpE n=2 Tax=Clostridiales RepID=H1CIH8_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
grpE; GrpE protein
L3_133_000M1_scaffold_214_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5630..7483
DNA (1854bp) protein (618aa)
Chaperone protein DnaK n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTB9_9FIRM
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
dnaK; chaperone protein DnaK
L3_133_000M1_scaffold_214_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7585..8751
DNA (1167bp) protein (389aa)
Chaperone protein DnaJ n=2 Tax=Clostridiales RepID=G9YTB8_9FIRM
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
dnaJ; chaperone protein DnaJ
L3_133_000M1_scaffold_214_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8814..10763
DNA (1950bp) protein (650aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29210.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
glycosyl transferase
L3_133_000M1_scaffold_214_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10798..11592
DNA (795bp) protein (265aa)
Histidinol phosphate phosphatase HisJ family protein n=2 Tax=Clostridiales RepID=H1CIH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54907.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
histidinol phosphate phosphatase family protein
L3_133_000M1_scaffold_214_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11606..12031
DNA (426bp) protein (142aa)
rpiB1; ribose 5-phosphate isomerase RpiB1 (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTB5_9FIRM
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EHM44146.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_133_000M1_scaffold_214_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12086..13366)
DNA (1281bp) protein (427aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BSW9_9CLOT
L3_133_000M1_scaffold_214_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13366..14349)
DNA (984bp) protein (328aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Delta-aminolevulinic acid dehydratase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTB3_9FIRM
delta-aminolevulinic acid dehydratase
L3_133_000M1_scaffold_214_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14366..15853)
DNA (1488bp) protein (496aa)
uroporphyrinogen-III synthase/uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107 4.2.1.75)
Uroporphyrinogen-III C-methyltransferase n=2 Tax=Clostridiales RepID=H1CIH0_9FIRM
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:EHO29205.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_214_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15838..16728)
DNA (891bp) protein (297aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Porphobilinogen deaminase n=2 Tax=Clostridiales RepID=G9YTB1_9FIRM
porphobilinogen deaminase
L3_133_000M1_scaffold_214_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16725..18359)
DNA (1635bp) protein (545aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YTB0_9FIRM
L3_133_000M1_scaffold_214_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18368..19063)
DNA (696bp) protein (232aa)
Precorrin-2 C(20)-methyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BJU6_9CLOT
Precorrin-2 C(20)-methyltransferase {ECO:0000313|EMBL:ERI72088.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
precorrin-2 C20-methyltransferase
L3_133_000M1_scaffold_214_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19060..19914)
DNA (855bp) protein (285aa)
cobalt ABC transporter ATPase (EC:3.6.3.28)
Cobalt ABC transporter, ATP-binding protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG6_9FIRM
Cobalt ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHO29201.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_214_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19911..20690)
DNA (780bp) protein (260aa)
Cobalt ABC transporter, permease CbiQ n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG5_9FIRM
Cobalt ABC transporter, permease CbiQ {ECO:0000313|EMBL:EHO29200.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
cobalt ABC transporter permease CbiQ
L3_133_000M1_scaffold_214_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20690..20980)
DNA (291bp) protein (97aa)
Cobalt transport protein CbiN n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG4_9FIRM
Cobalt transport protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; Energy-coupling factor transporter probable substrate-capture protein CbiN {ECO:0000256|HAMAP-Rule:MF_00330}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cobalt transporter
L3_133_000M1_scaffold_214_21
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20994..21713)
DNA (720bp) protein (240aa)
Cobalt transport protein CbiM n=2 Tax=Clostridiales RepID=U2CS63_9CLOT
Cobalt transport protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Energy-coupling factor transporter probable substrate-capture protein CbiM {ECO:0000256|HAMAP-Rule:MF_01462}; Flags: Precursor;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
cobalt transport protein CbiM
L3_133_000M1_scaffold_214_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21908..22705)
DNA (798bp) protein (266aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29197.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
anaerobic cobalt chelatase
L3_133_000M1_scaffold_214_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22721..23368)
DNA (648bp) protein (216aa)
precorrin-8X methylmutase (EC:5.4.1.2)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29196.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_214_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23373..24869)
DNA (1497bp) protein (499aa)
adenosylcobyric acid synthase (glutamine-hydrolysing) (EC:6.3.5.10)
Cobyric acid synthase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIG0_9FIRM
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_214_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24869..25927)
DNA (1059bp) protein (353aa)
L-threonine-O-3-phosphate decarboxylase (EC:4.1.1.81)
Threonine-phosphate decarboxylase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIF9_9FIRM
Threonine-phosphate decarboxylase {ECO:0000313|EMBL:EHO29194.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_214_26
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25983..26960)
DNA (978bp) protein (326aa)
adenosylcobinamide-phosphate synthase (EC:6.3.1.10)
Cobalamin biosynthesis protein CobD n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B684_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54957.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_133_000M1_scaffold_214_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26957..27562)
DNA (606bp) protein (202aa)
Phosphoglycerate mutase family protein n=2 Tax=Clostridiales RepID=U2APJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO29192.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
fructose-2,6-bisphosphatase
L3_133_000M1_scaffold_214_28
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27553..27909)
DNA (357bp) protein (119aa)
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase domain protein n=2 Tax=Clostridiales RepID=U2B7J0_9CLOT
Adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase domain protein {ECO:0000313|EMBL:ERI67743.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_133_000M1_scaffold_214_29
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27906..28673)
DNA (768bp) protein (256aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Cobalamin synthase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CES0_9CLOT
hypothetical protein
L3_133_000M1_scaffold_214_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28670..29191)
DNA (522bp) protein (174aa)
Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase (EC:2.7.7.62 2.7.1.156)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CIF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54954.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Displaying items 1-30 of 57 in total

View Taxonomy