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L3_133_000M1_scaffold_216

Search features with annotation key words

Displaying items 1-30 of 65 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_216_1
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1083..4208
DNA (3126bp) protein (1042aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WW91_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13575.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative outer membrane protein probably involved in nutrient binding
L3_133_000M1_scaffold_216_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4225..5988
DNA (1764bp) protein (588aa)
SusD family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB68_9PORP
SusD family protein {ECO:0000313|EMBL:CDD13576.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6525..7523)
DNA (999bp) protein (333aa)
Peptidase M28 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y596_9PORP
Peptidase M28 family {ECO:0000313|EMBL:CDD13577.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
aminopeptidase
L3_133_000M1_scaffold_216_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7787..7945)
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZSV5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13578.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8133..8675)
DNA (543bp) protein (181aa)
Carbonate dehydratase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X393_9PORP
Carbonate dehydratase {ECO:0000313|EMBL:CDD13579.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
carbonic anhydrase
L3_133_000M1_scaffold_216_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8707..9483)
DNA (777bp) protein (259aa)
Cof-like hydrolase n=3 Tax=Parabacteroides RepID=A7AGE3_9PORP
Cof-like hydrolase {ECO:0000313|EMBL:CDD13580.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9594..10769
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB73_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13581.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10879..11925)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86195.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_133_000M1_scaffold_216_9
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12001..12663)
DNA (663bp) protein (221aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZYK4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN08503.1}; TaxID=999419 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii CL02T12C29.;"
metal dependent phosphohydrolase
L3_133_000M1_scaffold_216_10
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12874..16422)
DNA (3549bp) protein (1183aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Pyruvate-flavodoxin oxidoreductase n=3 Tax=Parabacteroides RepID=A7AGD6_9PORP
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_133_000M1_scaffold_216_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16453..17631)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWA0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13585.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17788..18807)
DNA (1020bp) protein (340aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB75_9PORP
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:CDD13586.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000M1_scaffold_216_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19370..20320
DNA (951bp) protein (317aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Methylenetetrahydrofolate reductase n=3 Tax=Parabacteroides RepID=A7AGD1_9PORP
5,10-methylenetetrahydrofolate reductase
L3_133_000M1_scaffold_216_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20405..21448)
DNA (1044bp) protein (348aa)
L-asparaginase, type I n=2 Tax=Parabacteroides RepID=K5ZSB7_9PORP
L-asparaginase type I {ECO:0000313|EMBL:CDD13588.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L-asparaginase I
L3_133_000M1_scaffold_216_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21745..21849
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5YKV7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13589.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000M1_scaffold_216_16
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21913..22977
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AGC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13590.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase III subunit delta
L3_133_000M1_scaffold_216_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22992..24266)
DNA (1275bp) protein (425aa)
MATE efflux family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB79_9PORP
MATE efflux family protein {ECO:0000313|EMBL:CDD13591.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
multidrug efflux pump BexA
L3_133_000M1_scaffold_216_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24440..25438
DNA (999bp) protein (333aa)
Gliding motility-associated lipoprotein GldB n=2 Tax=Parabacteroides merdae RepID=K6BDK4_9PORP
Putative gliding motility-associated lipoprotein GldB {ECO:0000313|EMBL:EDN86180.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000M1_scaffold_216_19
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25532..27148)
DNA (1617bp) protein (539aa)
ABC transporter ATP-binding protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQM0_9PORP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDD13593.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ABC transporter ATP-binding protein
L3_133_000M1_scaffold_216_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27621..28778)
DNA (1158bp) protein (386aa)
Chaperone protein DnaJ n=2 Tax=Parabacteroides RepID=K6AJB0_9PORP
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chaperone protein DnaJ
L3_133_000M1_scaffold_216_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28821..29414)
DNA (594bp) protein (198aa)
Protein GrpE n=2 Tax=Parabacteroides RepID=K5YPC3_9PORP
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
molecular chaperon GrpE protein
L3_133_000M1_scaffold_216_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29656..31074
DNA (1419bp) protein (473aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZWH0_9PORP
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:CDD13596.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
PDZ domain-containing protein
L3_133_000M1_scaffold_216_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31090..33567
DNA (2478bp) protein (826aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Endonuclease MutS2 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5B2_9PORP
DNA mismatch repair protein MutS
L3_133_000M1_scaffold_216_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33580..34662
DNA (1083bp) protein (361aa)
Magnesium and cobalt transporter CorA n=2 Tax=Parabacteroides RepID=K5ZJC2_9PORP
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Mg2+/Co2+ transport protein
L3_133_000M1_scaffold_216_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34659..35258)
DNA (600bp) protein (200aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6AJA5_9PORP
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDD13599.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
serine type site-specific recombinase
L3_133_000M1_scaffold_216_26
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35593..35979
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWB1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13600.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_216_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36166..38652
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XB88_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13601.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
copper/silver resistance-related transport membrane protein
L3_133_000M1_scaffold_216_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38674..39114
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y5B8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13602.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
copper/silver resistance-related transport membrane protein
L3_133_000M1_scaffold_216_29
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39083..40030
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WQM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13603.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
copper/silver resistance-related transport membrane protein
L3_133_000M1_scaffold_216_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40114..41844
DNA (1731bp) protein (577aa)
Efflux transporter RND family MFP subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X3B1_9PORP
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD13604.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
metal transport-like protein
Displaying items 1-30 of 65 in total

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