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L3_133_000M1_scaffold_219

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_219_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(217..720)
DNA (504bp) protein (168aa)
Low molecular weight protein-tyrosine-phosphatase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D8_BIFAA
ptpA; low molecular weight protein-tyrosine-phosphatase
Phosphotyrosine protein phosphatase {ECO:0000313|EMBL:KIM01391.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_2
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(727..1392)
DNA (666bp) protein (222aa)
Dihydrofolate reductase {ECO:0000313|EMBL:KFI96567.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KFI96567.1};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Dihydrofolate reductase n=2 Tax=Bifidobacterium adolescentis RepID=A1A0D7_BIFAA
dihydrofolate reductase
L3_133_000M1_scaffold_219_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1471..2271)
DNA (801bp) protein (267aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GME8_9BIFI
L3_133_000M1_scaffold_219_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2600..3013
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D5_BIFAA
Peroxiredoxin {ECO:0000313|EMBL:KIM02235.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
hypothetical protein
L3_133_000M1_scaffold_219_5
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3118..4152)
DNA (1035bp) protein (345aa)
Universal stress family protein n=2 Tax=Bifidobacterium RepID=A7A496_BIFAD
universal stress family protein
Universal stress family protein {ECO:0000313|EMBL:AII75818.1}; Universal stress protein {ECO:0000313|EMBL:KIM02236.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_6
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4314..5063)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GN01_9BIFI
hypothetical protein
Invasion-associated cell wall-associated hydrolase {ECO:0000313|EMBL:KFI96563.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_133_000M1_scaffold_219_7
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5126..6058)
DNA (933bp) protein (311aa)
CHAP domain protein n=2 Tax=Bifidobacterium RepID=A7A494_BIFAD
hypothetical protein
Amidase {ECO:0000313|EMBL:KIM02238.1}; CHAP domain containing protein {ECO:0000313|EMBL:AII75816.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05387.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6265..7407
DNA (1143bp) protein (381aa)
serC; phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine transaminase {ECO:0000256|SAAS:SAAS00182444}; EC=2.6.1.52 {ECO:0000256|SAAS:SAAS00182444};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Probable phosphoserine aminotransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0D1_BIFAA
L3_133_000M1_scaffold_219_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7434..7688
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0D0_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDN83725.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
L3_133_000M1_scaffold_219_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7808..8998)
DNA (1191bp) protein (397aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Sensor protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C9_BIFAA
sensor protein
L3_133_000M1_scaffold_219_11
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9180..9860
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Bifidobacterium RepID=A7A490_BIFAD
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
response regulator of two-component system
L3_133_000M1_scaffold_219_12
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10181..12061
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS76_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18594.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
myosin-cross-reactive antigen
L3_133_000M1_scaffold_219_13
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12289..13029)
DNA (741bp) protein (247aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium RepID=A1A0C6_BIFAA
gpmA; phosphoglyceromutase
L3_133_000M1_scaffold_219_14
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13122..14195)
DNA (1074bp) protein (358aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
Probable 1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0C5_BIFAA
1,4-dihydroxy-2-naphthoate octaprenyltransferase
L3_133_000M1_scaffold_219_15
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14373..16052)
DNA (1680bp) protein (560aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00252}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Lysine--tRNA ligase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H0X7_9BIFI
lysyl-tRNA synthetase
L3_133_000M1_scaffold_219_16
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16383..17537
DNA (1155bp) protein (385aa)
AraJ-like protein probably involved in transport of arabinose polymers n=2 Tax=Bifidobacterium RepID=A1A0C3_BIFAA
AraJ-like protein probably involved in transport of arabinose polymers
AraJ-like protein {ECO:0000313|EMBL:KFI96553.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
L3_133_000M1_scaffold_219_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17902..19719
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS81_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18599.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
putative membrane protein possibly involved in transport
L3_133_000M1_scaffold_219_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19678..20292)
DNA (615bp) protein (205aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=A1A0C1_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJE05375.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_19
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20289..22124)
DNA (1836bp) protein (612aa)
PspC domain protein n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A481_BIFAD
PspC domain protein {ECO:0000313|EMBL:KFI96550.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
PspC domain protein
L3_133_000M1_scaffold_219_20
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22316..23815
DNA (1500bp) protein (500aa)
PspC domain protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z7_9BIFI
PspC domain protein {ECO:0000313|EMBL:EDN83713.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
histidine kinase sensor of two component system
L3_133_000M1_scaffold_219_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23869..24549
DNA (681bp) protein (227aa)
Transcriptional regulator, LuxR family n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A478_BIFAD
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EDN83711.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
response regulator of two-component system
L3_133_000M1_scaffold_219_22
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24949..26235)
DNA (1287bp) protein (429aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Serine--tRNA ligase n=2 Tax=Bifidobacterium RepID=SYS_BIFAA
L3_133_000M1_scaffold_219_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26369..27556
DNA (1188bp) protein (396aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=A1A0B6_BIFAA
hypothetical protein
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KIM02250.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27611..28459)
DNA (849bp) protein (283aa)
Transcription antiterminator similar to LicT n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H5Z3_9BIFI
transcription antiterminator similar to LicT
Transcription antiterminator BglG {ECO:0000313|EMBL:KIM02251.1}; Transcription antiterminator similar to LicT {ECO:0000313|EMBL:AJE05369.1}; Transcription antiterminator, BglG family {ECO:0000313|EMBL:AII75799.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_25
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28491..30584)
DNA (2094bp) protein (698aa)
Phosphotransferase system, EIIC n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A473_BIFAD
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EDN83705.1}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
ptsG; glucose-specific II BC component
L3_133_000M1_scaffold_219_26
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30926..32581
DNA (1656bp) protein (552aa)
pgm; phosphoglucomutase (EC:5.4.2.2)
Phosphoglucomutase n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0B3_BIFAA
Phosphoglucomutase {ECO:0000313|EMBL:BAF39146.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_133_000M1_scaffold_219_27
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32797..33612
DNA (816bp) protein (272aa)
Response regulator receiver domain protein n=2 Tax=Bifidobacterium RepID=A7A468_BIFAD
two-component response regulator
Response regulator receiver domain protein {ECO:0000313|EMBL:CCY19438.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_133_000M1_scaffold_219_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33614..35002
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0B1_BIFAA
two-component sensor histidine kinase
Two-component sensor histidine kinase {ECO:0000313|EMBL:AII75795.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_219_29
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35107..36462
DNA (1356bp) protein (452aa)
Ribonuclease H n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GPU5_9BIFI
Ribonuclease H {ECO:0000313|EMBL:CCY19435.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
ribonuclease H
L3_133_000M1_scaffold_219_30
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36683..37381
DNA (699bp) protein (233aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00020824}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170, ECO:0000256|SAAS:SAAS00087684};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Ribose-5-phosphate isomerase A n=3 Tax=Bifidobacterium RepID=RPIA_BIFAA
Displaying items 1-30 of 52 in total

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