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L3_133_000M1_scaffold_236

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Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_236_1
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..790)
DNA (789bp) protein (263aa)
EDD domain protein, DegV family n=5 Tax=Erysipelotrichaceae RepID=B0N3H0_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:CCZ31676.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
DAK2 domain/DegV family protein
L3_133_000M1_scaffold_236_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

974..1339
DNA (366bp) protein (122aa)
Transcriptional regulator, GntR family n=5 Tax=Erysipelotrichaceae RepID=B0N3H1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47801.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
GntR family transcriptional regulator
L3_133_000M1_scaffold_236_3
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1303..2241
DNA (939bp) protein (313aa)
ABC transporter, ATP-binding protein n=5 Tax=Erysipelotrichaceae RepID=B0N3H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31674.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
ABC transporter-like protein
L3_133_000M1_scaffold_236_4
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

2213..4105
DNA (1893bp) protein (631aa)
Uncharacterized protein n=1 Tax=Clostridium ramosum DSM 1402 RepID=B0N3H3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18995.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_133_000M1_scaffold_236_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

4108..5664
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92220.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
L3_133_000M1_scaffold_236_6
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

5711..6016
DNA (306bp) protein (102aa)
Thioredoxin n=5 Tax=Erysipelotrichaceae RepID=B0N3H5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
trx; thioredoxin
L3_133_000M1_scaffold_236_7
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6136..6555
DNA (420bp) protein (140aa)
Nucleoside triphosphatase YtkD n=3 Tax=Coprobacillus RepID=G9R0H4_9FIRM
Nucleoside triphosphatase YtkD {ECO:0000313|EMBL:CCZ31669.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_133_000M1_scaffold_236_8
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6556..6996
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N3H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS18999.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_133_000M1_scaffold_236_9
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7036..7647
DNA (612bp) protein (204aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=G9R0H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31667.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000M1_scaffold_236_10
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7689..8024)
DNA (336bp) protein (112aa)
Uncharacterized protein n=5 Tax=Erysipelotrichaceae RepID=B0N3H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ31666.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
hypothetical protein
L3_133_000M1_scaffold_236_11
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8139..9320
DNA (1182bp) protein (394aa)
Aminotransferase, class I/II n=2 Tax=Erysipelotrichaceae RepID=B0N3I0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47811.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_133_000M1_scaffold_236_12
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9313..9918
DNA (606bp) protein (202aa)
HAD hydrolase, family IA n=3 Tax=Coprobacillus RepID=C3RNL1_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EHM92227.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
HAD-superfamily hydrolase
L3_133_000M1_scaffold_236_13
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10024..11529
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. D7 RepID=C3RNL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47813.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
ErfK family protein
L3_133_000M1_scaffold_236_14
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11696..12715
DNA (1020bp) protein (340aa)
M42 glutamyl aminopeptidase n=4 Tax=Erysipelotrichaceae RepID=B0N3I3_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EDS19005.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
peptidase M42 family protein
L3_133_000M1_scaffold_236_15
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12732..13559
DNA (828bp) protein (276aa)
HAD hydrolase, family IIB n=4 Tax=Erysipelotrichaceae RepID=B0N3I4_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDS19006.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_133_000M1_scaffold_236_16
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13594..14307
DNA (714bp) protein (238aa)
Trehalose operon repressor n=4 Tax=Erysipelotrichaceae RepID=B0N3I5_9FIRM
Trehalose operon repressor {ECO:0000313|EMBL:EHM92231.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
treR; trehalose operon repressor
L3_133_000M1_scaffold_236_17
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14307..16115
DNA (1809bp) protein (603aa)
MutS domain V protein n=2 Tax=Erysipelotrichaceae RepID=B0N3I6_9FIRM
MutS domain V protein {ECO:0000313|EMBL:EDS19008.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
DNA mismatch repair protein
L3_133_000M1_scaffold_236_18
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16217..18109
DNA (1893bp) protein (631aa)
PTS system, trehalose-specific IIBC component n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R0I5_9FIRM
PTS system, trehalose-specific IIBC component {ECO:0000313|EMBL:EHM92233.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
PTS system trehalose transporter subunit IIABC
L3_133_000M1_scaffold_236_19
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

18126..19763
DNA (1638bp) protein (546aa)
Alpha,alpha-phosphotrehalase {ECO:0000313|EMBL:EDS19010.1}; EC=3.2.1.93 {ECO:0000313|EMBL:EDS19010.1};; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
Alpha,alpha-phosphotrehalase n=2 Tax=Erysipelotrichaceae RepID=B0N3I8_9FIRM
treA; trehalose-6-phosphate hydrolase
L3_133_000M1_scaffold_236_20
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19946..21406
DNA (1461bp) protein (487aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=B0N3I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47820.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_133_000M1_scaffold_236_21
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21826..22653
DNA (828bp) protein (276aa)
DNA-binding helix-turn-helix protein n=4 Tax=Erysipelotrichaceae RepID=B0N3J0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92236.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
Predicted transcriptional regulators
L3_133_000M1_scaffold_236_22
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22894..23316
DNA (423bp) protein (141aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=2 Tax=Coprobacillus RepID=C3RNM1_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EHM92237.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
hypothetical protein
L3_133_000M1_scaffold_236_23
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23586..24320
DNA (735bp) protein (245aa)
pilD; type IV prepilin-like leader peptidase PilD (EC:3.4.23.43)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=C3RNM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35387.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000M1_scaffold_236_24
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24334..25527
DNA (1194bp) protein (398aa)
Bacterial type II secretion system domain protein F n=4 Tax=Erysipelotrichaceae RepID=B0N3J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ47824.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
pilC; type IV fimbrial assembly protein PilC
L3_133_000M1_scaffold_236_25
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

25537..26433
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=G9R0J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM92240.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
pilM; pilus assembly protein ATPase PilM
L3_133_000M1_scaffold_236_26
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26442..27086
DNA (645bp) protein (215aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS19017.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
L3_133_000M1_scaffold_236_27
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27079..27711
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:183 RepID=R5RRC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35407.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000M1_scaffold_236_28
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

27729..28193
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=B0N3J7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35408.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000M1_scaffold_236_29
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28190..29122
DNA (933bp) protein (311aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=5 Tax=Erysipelotrichaceae RepID=B0N3J8_9FIRM
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:CCZ35410.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
L3_133_000M1_scaffold_236_30
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29160..30584
DNA (1425bp) protein (475aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=4 Tax=Erysipelotrichaceae RepID=B0N3J9_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:EDS19021.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
putative prepilin-type N-cleavage/methylation domain protein
Displaying items 1-30 of 51 in total

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