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L3_133_000M1_scaffold_241

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_241_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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473..1195
DNA (723bp) protein (241aa)
Cof-like hydrolase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NPU9_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CCY98962.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Cof-like hydrolase
L3_133_000M1_scaffold_241_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1237..2547
DNA (1311bp) protein (437aa)
Metal-dependent amidase/aminoacylase/carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5D2_9FIRM
Metal-dependent amidase/aminoacylase/carboxypeptidase {ECO:0000313|EMBL:CCY98963.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Metal-dependent amidase/aminoacylase/carboxypeptidase
L3_133_000M1_scaffold_241_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2617..3840
DNA (1224bp) protein (408aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type spermidine/putrescine transport systems, ATPase components (EC:3.6.3.31)
ABC-type spermidine/putrescine transport systems ATPase components n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAR9_9FIRM
L3_133_000M1_scaffold_241_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3833..4687
DNA (855bp) protein (285aa)
ABC-type spermidine/putrescine transport system permease component I n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4M8_9FIRM
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:CCY98965.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_133_000M1_scaffold_241_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4684..5478
DNA (795bp) protein (265aa)
ABC-type spermidine/putrescine transport system permease component II n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNM3_9FIRM
ABC-type spermidine/putrescine transport system permease component II {ECO:0000313|EMBL:CCY98966.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type spermidine/putrescine transport system, permease component II
L3_133_000M1_scaffold_241_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5468..6514
DNA (1047bp) protein (349aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
spermidine/putrescine ABC transporter ATP-binding subunit (EC:3.6.3.31)
Spermidine/putrescine ABC transporter ATP-binding subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NPV3_9FIRM
L3_133_000M1_scaffold_241_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6514..7332
DNA (819bp) protein (273aa)
ABC-type spermidine/putrescine transport system permease component I n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5D8_9FIRM
ABC-type spermidine/putrescine transport system permease component I {ECO:0000313|EMBL:CCY98968.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type spermidine/putrescine transport system, permease component I
L3_133_000M1_scaffold_241_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7345..8940
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98969.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type spermidine/putrescine transport system, permease component II
L3_133_000M1_scaffold_241_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8910..9182
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98969.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Spermidine/putrescine-binding periplasmic protein
L3_133_000M1_scaffold_241_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9243..10256
DNA (1014bp) protein (338aa)
Spermidine/putrescine-binding periplasmic protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4N4_9FIRM
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:CCY98970.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Spermidine/putrescine-binding periplasmic protein
L3_133_000M1_scaffold_241_11
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10287..11927
DNA (1641bp) protein (547aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Blautia sp. KLE 1732 RepID=U2D8W9_9FIRM
L3_133_000M1_scaffold_241_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12083..12961)
DNA (879bp) protein (293aa)
Methionine synthase I (Cobalamin-dependent) methyltransferase domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNM7_9FIRM
Methionine synthase I (Cobalamin-dependent) methyltransferase domain {ECO:0000313|EMBL:CCY98971.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Methionine synthase I (cobalamin-dependent), methyltransferase domain
L3_133_000M1_scaffold_241_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13094..13885
DNA (792bp) protein (264aa)
Capsular polysaccharide biosynthesis protein (EC:3.1.3.48)
Capsular polysaccharide biosynthesis protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NPV8_9FIRM
Capsular polysaccharide biosynthesis protein {ECO:0000313|EMBL:CCY98972.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_241_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13972..15810
DNA (1839bp) protein (613aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glutamine--fructose-6-phosphate transaminase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5E3_9FIRM
L3_133_000M1_scaffold_241_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15917..16849)
DNA (933bp) protein (311aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAT1_9FIRM
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CCY98974.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_241_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16846..17880)
DNA (1035bp) protein (345aa)
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
dTDP-glucose 4,6-dehydratase n=2 Tax=Ruminococcus RepID=D4LJ32_9FIRM
L3_133_000M1_scaffold_241_17
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17975..18871)
DNA (897bp) protein (299aa)
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL19844.1}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706, ECO:0000313|EMBL:CBL19844.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Glucose-1-phosphate thymidylyltransferase n=3 Tax=Clostridiales RepID=D4LJ33_9FIRM
L3_133_000M1_scaffold_241_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19001..20182)
DNA (1182bp) protein (394aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=2 Tax=Clostridiales RepID=R5NPW3_9FIRM
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:CCY98977.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_133_000M1_scaffold_241_19
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20387..21385
DNA (999bp) protein (333aa)
Predicted acyltransferases n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GXV8_9FIRM
Predicted acyltransferases {ECO:0000313|EMBL:CDE31598.1}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
Predicted acyltransferases
L3_133_000M1_scaffold_241_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21556..22266
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4I4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98673.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_241_21
unknown

Not on your lists

22242..22373
DNA (132bp) protein (44aa)

This feature has no annotations

L3_133_000M1_scaffold_241_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22351..23472)
DNA (1122bp) protein (374aa)
glucose-1-phosphate adenylyltransferase, GlgD subunit (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase GlgD subunit n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNY6_9FIRM
Glucose-1-phosphate adenylyltransferase GlgD subunit {ECO:0000313|EMBL:CCY98672.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_241_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23474..24598)
DNA (1125bp) protein (375aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
glucose-1-phosphate adenylyltransferase (EC:2.7.7.27)
Glucose-1-phosphate adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMU7_9FIRM
L3_133_000M1_scaffold_241_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24887..25621
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98670.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_241_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25710..26807
DNA (1098bp) protein (366aa)
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9X1_9FIRM
Metal ion transporter metal ion (Mn2+/Fe2+) transporter (Nramp) family {ECO:0000313|EMBL:CCY98669.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Mn2+ and Fe2+ transporters of the NRAMP family
L3_133_000M1_scaffold_241_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27074..29488
DNA (2415bp) protein (805aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4H9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98668.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_241_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29563..30357)
DNA (795bp) protein (265aa)
ABC-type nitrate/sulfonate/bicarbonate transport system permease component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NNY0_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system permease component {ECO:0000313|EMBL:CCY98667.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
L3_133_000M1_scaffold_241_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30350..31117)
DNA (768bp) protein (256aa)
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NMU3_9FIRM
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component {ECO:0000313|EMBL:CCY98666.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L3_133_000M1_scaffold_241_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31184..31903
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N3V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98665.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_241_30
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31972..32685)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9W7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98664.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Displaying items 1-30 of 70 in total

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