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L3_133_000M1_scaffold_245

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_245_1
unknown

Not on your lists

548..1918
DNA (1371bp) protein (457aa)

This feature has no annotations

L3_133_000M1_scaffold_245_2
unknown

Not on your lists

2170..2799
DNA (630bp) protein (210aa)

This feature has no annotations

L3_133_000M1_scaffold_245_3
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2803..3558
DNA (756bp) protein (252aa)
peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.66)
Uncharacterized protein n=1 Tax=Bacillus cereus VD140 RepID=R8T3Z2_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EOQ01687.1}; TaxID=1053235 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus VD140.;"
L3_133_000M1_scaffold_245_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4300..6597)
DNA (2298bp) protein (766aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41026.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_133_000M1_scaffold_245_5
Phascolarctobacterium succinatutens, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6685..7239)
DNA (555bp) protein (185aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1263101 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium succinatutens CAG:287.;"
ppa; Inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=2 Tax=Phascolarctobacterium succinatutens RepID=E8LB35_9FIRM
L3_133_000M1_scaffold_245_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7261..7851)
DNA (591bp) protein (197aa)
GCN5-related N-acetyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYM1_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDB42120.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
GCN5-like N-acetyltransferase
L3_133_000M1_scaffold_245_7
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7854..8297)
DNA (444bp) protein (148aa)
Acetyltransferase GNAT family n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MLQ0_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY90594.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
N-acetyltransferase GCN5
L3_133_000M1_scaffold_245_8
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8452..9606)
DNA (1155bp) protein (385aa)
glxK; glycerate kinase GlxK (EC:2.7.1.31)
Glycerate kinase n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6ELM8_9FIRM
Glycerate kinase {ECO:0000313|EMBL:CDA90902.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
L3_133_000M1_scaffold_245_9
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9832..11205)
DNA (1374bp) protein (458aa)
Metallophosphoesterase n=1 Tax=Clostridium sp. CAG:678 RepID=R5L3Q1_9CLOT
Metallophosphoesterase {ECO:0000313|EMBL:CCY67916.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
Icc family phosphohydrolase
L3_133_000M1_scaffold_245_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11227..11814)
DNA (588bp) protein (196aa)
TOPRIM domain-containing protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HUN2_9FIRM
TOPRIM domain-containing protein {ECO:0000313|EMBL:CDB41563.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
TOPRIM domain-containing protein
L3_133_000M1_scaffold_245_11
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11885..12925)
DNA (1041bp) protein (347aa)
DNA polymerase III delta subunit n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLR7_9CLOT
DNA polymerase III delta subunit {ECO:0000313|EMBL:CDC13088.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
DNA polymerase III subunit delta
L3_133_000M1_scaffold_245_12
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12954..15158)
DNA (2205bp) protein (735aa)
hypothetical protein n=1 Tax=Clostridium sporosphaeroides RepID=UPI00036492A3
Competence protein {ECO:0000313|EMBL:EJF41296.1}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
putative membrane protein
L3_133_000M1_scaffold_245_13
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15195..15734)
DNA (540bp) protein (180aa)
Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins (EC:2.4.2.7)
Phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX30_9FIRM
Phosphoribosyltransferase {ECO:0000313|EMBL:CDB41560.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_133_000M1_scaffold_245_14
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15777..16115)
DNA (339bp) protein (113aa)
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E5G7_9FIRM
Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases {ECO:0000313|EMBL:CDA91861.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
HIT domain protein
L3_133_000M1_scaffold_245_15
Clostridium sp. MSTE9, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(16166..18805)
DNA (2640bp) protein (880aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1105031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. MSTE9.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
alanyl-tRNA synthase n=1 Tax=Clostridium sporosphaeroides RepID=UPI000368641D
L3_133_000M1_scaffold_245_16
unknown

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comp(19373..19936)
DNA (564bp) protein (188aa)

This feature has no annotations

L3_133_000M1_scaffold_245_17
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

20041..20256
DNA (216bp) protein (72aa)
DNA-binding helix-turn-helix protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MRJ7_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDB88472.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
DNA-binding protein
L3_133_000M1_scaffold_245_18
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20468..22081)
DNA (1614bp) protein (538aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Penicillin-binding protein transpeptidase domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6P0X6_9CLOT
Penicillin-binding protein transpeptidase domain protein {ECO:0000313|EMBL:CDC12141.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_133_000M1_scaffold_245_19
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22242..22475
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F1T6_CLOS4
Uncharacterized protein {ECO:0000313|EMBL:ERI99196.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
L3_133_000M1_scaffold_245_20
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23376..24005)
DNA (630bp) protein (210aa)
GNAT family Acetyltransferase n=2 Tax=Clostridium symbiosum RepID=E7GNL1_CLOSY
GNAT family Acetyltransferase {ECO:0000313|EMBL:EGA93620.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_133_000M1_scaffold_245_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24030..24584)
DNA (555bp) protein (185aa)
Putative uncharacterized protein n=1 Tax=Clostridium sp. 7_3_54FAA RepID=G5FD79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF05597.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_133_000M1_scaffold_245_22
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24702..25523
DNA (822bp) protein (274aa)
Transcriptional regulator, MerR family n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2D1L0_CLOSY
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ERI73431.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
transcriptional regulator, MerR family
L3_133_000M1_scaffold_245_23
unknown

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comp(25558..25689)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_133_000M1_scaffold_245_24
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26273..27424)
DNA (1152bp) protein (384aa)
Toxic anion resistance family protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GL55_EUBLK
toxic anion resistance family protein
Toxic anion resistance family protein {ECO:0000313|EMBL:ADO36346.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000M1_scaffold_245_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27504..28667)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031F5EEC
Uncharacterized protein {ECO:0000313|EMBL:CCY97485.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
5-bromo-4-chloroindolyl phosphate hydrolysis protein
L3_133_000M1_scaffold_245_26
Anaerotruncus sp. CAG:528, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28997..30250)
DNA (1254bp) protein (418aa)
Aminopeptidase putative n=1 Tax=Anaerotruncus sp. CAG:528 RepID=R5XC94_9FIRM
Aminopeptidase putative {ECO:0000313|EMBL:CDA12480.1}; TaxID=1262700 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:528.;"
peptidase M28
L3_133_000M1_scaffold_245_27
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30442..31185
DNA (744bp) protein (248aa)
ABC transporter related n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIH8_CLOPH
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABX42430.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_133_000M1_scaffold_245_28
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31182..32090
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KIH9_CLOPH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX42431.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_133_000M1_scaffold_245_29
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32096..33091)
DNA (996bp) protein (332aa)
Putative uncharacterized protein n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U3P5_ETHHY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU27645.1}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
L3_133_000M1_scaffold_245_30
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33303..33689
DNA (387bp) protein (129aa)
Ferric uptake regulator family protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6E5B5_9FIRM
Ferric uptake regulator family protein {ECO:0000313|EMBL:CDA91801.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Fe2+/Zn2+ uptake regulation proteins
Displaying items 1-30 of 54 in total

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