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L3_133_000M1_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_251_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..635)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CC91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55268.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_000M1_scaffold_251_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1520..2794)
DNA (1275bp) protein (425aa)
UPF0597 protein HMPREF1085_00481 n=4 Tax=Clostridium RepID=R0AN16_9CLOT
UPF0597 protein HMPREF1097_00735 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_133_000M1_scaffold_251_3
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2812..3279)
DNA (468bp) protein (156aa)
Endoribonuclease L-PSP n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA2_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:EEQ62296.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
endoribonuclease L-PSP
L3_133_000M1_scaffold_251_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3283..4224)
DNA (942bp) protein (314aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
lipoate-protein ligase A (EC:6.3.2.-)
Lipoate--protein ligase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UW38_CLOBO
L3_133_000M1_scaffold_251_5
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4231..5580)
DNA (1350bp) protein (450aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
lpdA; dihydrolipoyl dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWA4_9FIRM
L3_133_000M1_scaffold_251_6
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5704..5979
DNA (276bp) protein (92aa)
FkbM family methyltransferase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LI26_9FIRM
FkbM family methyltransferase {ECO:0000313|EMBL:EOS58223.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
FkbM family methyltransferase
L3_133_000M1_scaffold_251_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6292..7179
DNA (888bp) protein (296aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35283.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_133_000M1_scaffold_251_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7528..8031
DNA (504bp) protein (168aa)
xenobiotic ABC transporter ATPase (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWJ5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99532.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_133_000M1_scaffold_251_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8124..9263)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LVZ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62994.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase
L3_133_000M1_scaffold_251_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9293..10726)
DNA (1434bp) protein (478aa)
Na+/H+ antiporter NhaC n=1 Tax=Oscillibacter sp. 1-3 RepID=R9LW10_9FIRM
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EOS62995.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
nhaC; sodium/proton antiporter NhaC
L3_133_000M1_scaffold_251_11
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11017..11697)
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000363D3F1
Predicted membrane protein {ECO:0000313|EMBL:CEN78406.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
hypothetical protein
L3_133_000M1_scaffold_251_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12216..12980
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CMZ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54223.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_133_000M1_scaffold_251_13
unknown

Not on your lists

comp(13277..13729)
DNA (453bp) protein (151aa)

This feature has no annotations

L3_133_000M1_scaffold_251_14
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16204..16758)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LQI1_THEPS
hypothetical protein
Tax=S_Thermacetogenium_phaeum_55_64
L3_133_000M1_scaffold_251_15

Not on your lists

17085..17327
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RQ45_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC45649.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_251_16
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17625..18044
DNA (420bp) protein (140aa)
Single-strand binding family protein n=2 Tax=Clostridium hathewayi RepID=D3ABN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61647.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
L3_133_000M1_scaffold_251_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18156..18941
DNA (786bp) protein (262aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABN5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00782.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_133_000M1_scaffold_251_18
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18938..19255
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JPX9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK95148.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_133_000M1_scaffold_251_19
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19309..20394
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Clostridium hathewayi RepID=D3ABN6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFD00783.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L3_133_000M1_scaffold_251_20
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20427..21263
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5FJT7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03903.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
hypothetical protein
L3_133_000M1_scaffold_251_21
Clostridium sp. 7_3_54FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21235..21816
DNA (582bp) protein (194aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=R5F814_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHF03902.1}; TaxID=665940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_3_54FAA.;"
RNA polymerase sigma factor, sigma-70 family
L3_133_000M1_scaffold_251_22
unknown

Not on your lists

21834..22097
DNA (264bp) protein (88aa)

This feature has no annotations

L3_133_000M1_scaffold_251_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22094..22327
DNA (234bp) protein (78aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CBA4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_133_000M1_scaffold_251_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22518..23039
DNA (522bp) protein (174aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2DA34_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78312.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_133_000M1_scaffold_251_25

Not on your lists

23029..23862
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NYR6_9FIRM
Uncultured bacterium extrachromosomal DNA RGI00017 {ECO:0000313|EMBL:CDL65502.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
L3_133_000M1_scaffold_251_26
unknown

Not on your lists

23864..24319
DNA (456bp) protein (152aa)

This feature has no annotations

L3_133_000M1_scaffold_251_27
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24316..25008
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C6Z7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE14335.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_133_000M1_scaffold_251_28
unknown

Not on your lists

24996..25211
DNA (216bp) protein (72aa)

This feature has no annotations

L3_133_000M1_scaffold_251_29
unknown

Not on your lists

25231..25671
DNA (441bp) protein (147aa)

This feature has no annotations

L3_133_000M1_scaffold_251_30
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25652..26119
DNA (468bp) protein (156aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2C2M3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78308.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Displaying items 1-30 of 127 in total

View Taxonomy