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L3_133_000M1_scaffold_262

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Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_262_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19..210
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H4V2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97064.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L3_133_000M1_scaffold_262_2

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comp(272..571)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RL50_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46103.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_262_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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820..1740
DNA (921bp) protein (307aa)
Site-specific recombinase XerD n=3 Tax=Clostridiales RepID=D4LS26_9FIRM
Site-specific recombinase XerD
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EEU98164.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_133_000M1_scaffold_262_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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2133..2522
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45310.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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2561..3085
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1H7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45311.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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3218..4492
DNA (1275bp) protein (425aa)
UPF0597 protein BN455_00628 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX46_9FIRM
UPF0597 protein BN455_00628 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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4647..5315
DNA (669bp) protein (223aa)
sdhB; L-serine dehydratase iron-sulfur-dependent beta subunit SdhB (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent beta subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQQ2_9FIRM
L-serine dehydratase iron-sulfur-dependent beta subunit {ECO:0000313|EMBL:CCX45313.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_262_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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5312..6190
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATM8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45314.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L-serine dehydratase
L3_133_000M1_scaffold_262_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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6331..7284
DNA (954bp) protein (318aa)
Putative 3'-5' exonuclease n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICG1_9FIRM
Putative 3'-5' exonuclease {ECO:0000313|EMBL:CCY39765.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative 3'-5' exonuclease
L3_133_000M1_scaffold_262_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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7296..8636
DNA (1341bp) protein (447aa)
uncharacterized domain HDIG (EC:2.7.7.72 3.1.3.- 3.1.4.-)
HDIG domain protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1I2_9FIRM
HDIG domain protein {ECO:0000313|EMBL:CCX45316.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_262_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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8702..9481
DNA (780bp) protein (260aa)
RNA methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45317.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_262_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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9494..10738
DNA (1245bp) protein (415aa)
DNA protecting protein DprA n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQQ9_9FIRM
DNA protecting protein DprA {ECO:0000313|EMBL:CCX45318.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative smf protein
L3_133_000M1_scaffold_262_13
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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10744..13083
DNA (2340bp) protein (780aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6IFE6_9FIRM
Tax=BJP_IG2069_Clostridiales_48_15
L3_133_000M1_scaffold_262_14

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13129..14442
DNA (1314bp) protein (438aa)
trmFO; tRNA methyltransferase (EC:2.1.1.74)
tRNA:M(5)U-54 methyltransferase n=1 Tax=human gut metagenome RepID=K1SZP0_9ZZZZ
tRNA:M(5)U-54 methyltransferase {ECO:0000313|EMBL:EKC66097.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_133_000M1_scaffold_262_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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14439..15464
DNA (1026bp) protein (342aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
plsX; acyl-ACP--phosphate acyltransferase (EC:2.3.1.-)
Phosphate acyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5I8_9FIRM
L3_133_000M1_scaffold_262_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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15464..16141
DNA (678bp) protein (226aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rnc; ribonuclease III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B177_9FIRM
L3_133_000M1_scaffold_262_17
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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16316..19876
DNA (3561bp) protein (1187aa)
Chromosome partition protein Smc n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P2B6_9FIRM
smc; chromosome segregation protein SMC
Tax=BJP_IG2069_Clostridiales_48_15
L3_133_000M1_scaffold_262_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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19893..20801
DNA (909bp) protein (303aa)
Signal recognition particle receptor FtsY n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5J7_9FIRM
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ftsY; Signal recognition particle receptor FtsY
L3_133_000M1_scaffold_262_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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20798..21388
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rdgB; nucleoside-triphosphatase (EC:3.6.1.15)
Non-canonical purine NTP pyrophosphatase n=2 Tax=root RepID=R5B185_9FIRM
L3_133_000M1_scaffold_262_20

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21375..21680
DNA (306bp) protein (102aa)
Protein containing RNA-binding, CRM domain protein n=1 Tax=human gut metagenome RepID=K1SKB7_9ZZZZ
Protein containing RNA-binding, CRM domain protein {ECO:0000313|EMBL:EKC54255.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_262_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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21677..22864
DNA (1188bp) protein (396aa)
Nicotinate-nucleotide adenylyltransferase {ECO:0000256|SAAS:SAAS00086517}; EC=2.7.7.18 {ECO:0000256|SAAS:SAAS00086517};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXR0_9FIRM
L3_133_000M1_scaffold_262_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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22845..24041
DNA (1197bp) protein (399aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATR6_9FIRM
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CCX46755.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
cell envelope-related function transcriptional attenuator common domain protein
L3_133_000M1_scaffold_262_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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24064..24420
DNA (357bp) protein (119aa)
Ribosomal silencing factor RsfS n=2 Tax=root RepID=R5B5K2_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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24510..26936
DNA (2427bp) protein (809aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B191_9FIRM
L3_133_000M1_scaffold_262_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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27041..27226
DNA (186bp) protein (62aa)
30S ribosomal protein S21 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUT7_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpsU; 30S ribosomal protein S21
L3_133_000M1_scaffold_262_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(27278..27841)
DNA (564bp) protein (188aa)
Uncharacterized conserved protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXR4_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCX46759.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

27981..28805
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46760.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_262_28
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

28877..29590
DNA (714bp) protein (238aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5K6_9FIRM
L3_133_000M1_scaffold_262_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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29609..30349
DNA (741bp) protein (247aa)
UDP-N-acetylmannosamine--N-acetylglucosaminyldiphosphoundecaprenol N-acetylmannosaminyltransferase (EC:2.4.1.187)
UDP-N-acetylmannosamine--N-acetylglucosaminyldiph osphoundecaprenol N-acetylmannosaminyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B194_9FIRM
UDP-N-acetylmannosamine--N-acetylglucosaminyldiph osphoundecaprenol N-acetylmannosaminyltransferase {ECO:0000313|EMBL:CCX46762.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_262_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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30336..31004
DNA (669bp) protein (223aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase n=2 Tax=root RepID=R5AUU3_9FIRM
Displaying items 1-30 of 60 in total

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