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L3_133_000M1_scaffold_264

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_264_1
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1..414
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XAC2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64739.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_133_000M1_scaffold_264_2
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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531..2876
DNA (2346bp) protein (782aa)
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLN5_9PORP
Phage tail tape measure protein, TP901 family, core region {ECO:0000313|EMBL:EJZ64740.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
prophage PRU01 tail tape measure protein
L3_133_000M1_scaffold_264_3
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3028..4389)
DNA (1362bp) protein (454aa)
Tryptophan synthase {ECO:0000256|SAAS:SAAS00015859}; EC=4.2.1.20 {ECO:0000256|SAAS:SAAS00015859};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain 1 n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ES23_9BACE
L3_133_000M1_scaffold_264_4
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4638..5216)
DNA (579bp) protein (193aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
Superoxide dismutase n=2 Tax=Bacteroidales RepID=K0XAC7_9PORP
superoxide dismutase
L3_133_000M1_scaffold_264_5
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5336..6238)
DNA (903bp) protein (301aa)
UPF0365 protein HMPREF9448_01228 n=2 Tax=Bacteroidales RepID=K0XLN9_9PORP
UPF0365 protein BN530_02408 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_133_000M1_scaffold_264_6
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6263..6718)
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X2I2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95340.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
nodulation efficiency protein D (NfeD)
L3_133_000M1_scaffold_264_7
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6737..8185)
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0WZZ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64747.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
hypothetical protein
L3_133_000M1_scaffold_264_8
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8220..8708)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ES18_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX95338.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_133_000M1_scaffold_264_9
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8944..9312
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XAD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64749.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
membrane protein
L3_133_000M1_scaffold_264_10
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10090..11016)
DNA (927bp) protein (309aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0XLP6_9PORP
GroES-like protein {ECO:0000313|EMBL:CCX95336.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
zinc-type alcohol dehydrogenase
L3_133_000M1_scaffold_264_11
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11260..14250
DNA (2991bp) protein (997aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X2I6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCX95335.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
outer membrane assembly protein
L3_133_000M1_scaffold_264_12
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14662..15786
DNA (1125bp) protein (375aa)
Uncharacterized protein n=3 Tax=root RepID=K0X002_9PORP
Prokaryotic ATPase {ECO:0000313|EMBL:CCX95334.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
hypothetical protein
L3_133_000M1_scaffold_264_13
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15825..18248
DNA (2424bp) protein (808aa)
Type I restriction-modification system (EC:2.1.1.72)
N-6 DNA methylase n=1 Tax=Bacteroides sp. CAG:20 RepID=R5ES13_9BACE
N-6 DNA methylase {ECO:0000313|EMBL:CCX95333.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
L3_133_000M1_scaffold_264_14
Odoribacter sp. CAG:788, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18259..18867
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Odoribacter sp. CAG:788 RepID=R5PHU6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ09481.1}; TaxID=1262909 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter sp. CAG:788.;"
L3_133_000M1_scaffold_264_15
unknown

Not on your lists

18860..18952
DNA (93bp) protein (31aa)

This feature has no annotations

L3_133_000M1_scaffold_264_16
Acinetobacter baumannii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18995..20233
DNA (1239bp) protein (413aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-137-C09 RepID=UPI00037AB2DF
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EXB03870.1}; TaxID=1310613 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter calcoaceticus/baumannii complex.;" source="Acinetobacter baumannii 1295743.;"
restriction modification system DNA specificity subunit
L3_133_000M1_scaffold_264_17
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20238..23372
DNA (3135bp) protein (1045aa)
Type I restriction-modification system, subunit R (EC:3.1.21.3)
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XLQ2_9PORP
HsdR family type I site-specific deoxyribonuclease {ECO:0000313|EMBL:EJZ64755.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
L3_133_000M1_scaffold_264_18
Bacteroides sp. CAG:20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23372..24067
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:20 RepID=R5EZ35_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCX96504.1}; TaxID=1262738 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:20.;"
Putative predicted metal-dependent hydrolase
L3_133_000M1_scaffold_264_19
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24079..24906
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K0X004_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EJZ64757.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
methionine sulfoxide reductase
L3_133_000M1_scaffold_264_20
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25639..26277)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Barnesiella intestinihominis YIT 11860 RepID=K0XAD9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KHM48766.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
L3_133_000M1_scaffold_264_21
Barnesiella viscericola, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26387..26710)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) RepID=Q5LGA8_BACFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF13677.1}; TaxID=880074 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella viscericola DSM 18177.;"
L3_133_000M1_scaffold_264_22
Parabacteroides johnsonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26962..28350
DNA (1389bp) protein (463aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BER7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEC95069.1}; TaxID=537006 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides johnsonii DSM 18315.;"
putative ATP/GTP-binding protein
L3_133_000M1_scaffold_264_23
Prevotella sp. CAG:1185, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28396..29517
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:1185 RepID=R5M961_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCY81672.1}; TaxID=1262921 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:1185.;"
hypothetical protein
L3_133_000M1_scaffold_264_24
Capnocytophaga sp. oral taxon 332, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29571..31526
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Capnocytophaga sp. oral taxon 332 str. F0381 RepID=L1P3X7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKY10311.1}; TaxID=1127692 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga.;" source="Capnocytophaga sp. oral taxon 332 str. F0381.;"
uncharacterized protein
L3_133_000M1_scaffold_264_25
Flavobacterium sp. MEB061, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31523..31879
DNA (357bp) protein (119aa)
SigF n=3 Tax=Campylobacter RepID=H7SZM8_CAMCO
Contig_14, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ22770.1}; TaxID=1587524 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. MEB061.;"
hypothetical protein
L3_133_000M1_scaffold_264_26
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32424..33050
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YJ54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21371.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_133_000M1_scaffold_264_27
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33047..33874
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=root RepID=R5Y3D6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21370.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_133_000M1_scaffold_264_28
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33897..34511
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y9F0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21369.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_133_000M1_scaffold_264_29
Bacteroides sp. CAG:144, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34508..34834
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5Y1T8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA21368.1}; TaxID=1262736 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:144.;"
hypothetical protein
L3_133_000M1_scaffold_264_30
Coprobacter sp. 177, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34824..35693
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:144 RepID=R5YXP7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KHM44204.1}; TaxID=1572646 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter sp. 177.;"
hypothetical protein
Displaying items 1-30 of 170 in total

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