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L3_133_000M1_scaffold_272

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_272_1
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..73)
DNA (72bp) protein (24aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5FB73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB61183.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
L3_133_000M1_scaffold_272_2
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

251..1300
DNA (1050bp) protein (350aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=8 Tax=Clostridium RepID=A8RSA5_9CLOT
L3_133_000M1_scaffold_272_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1461..2303
DNA (843bp) protein (281aa)
Short-chain dehydrogenase/reductase SDR n=2 Tax=Clostridium RepID=N9XGT8_9CLOT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ENZ14450.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
short-chain dehydrogenase/reductase SDR
L3_133_000M1_scaffold_272_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2316..3533)
DNA (1218bp) protein (406aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z1U3_9CLOT
L3_133_000M1_scaffold_272_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3868..4710
DNA (843bp) protein (281aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase n=3 Tax=Clostridium RepID=N9YQZ6_9CLOT
L3_133_000M1_scaffold_272_6
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4733..5539
DNA (807bp) protein (269aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RSA1_9CLOT
Gluconate 5-dehydrogenase {ECO:0000313|EMBL:ENZ51038.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
short-chain dehydrogenase/reductase SDR
L3_133_000M1_scaffold_272_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5683..6390
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XGF4_9CLOT
GntR family transcriptional regulator {ECO:0000313|EMBL:ENZ14446.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
GntR family transcriptional regulator
L3_133_000M1_scaffold_272_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6431..6619)
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9XGT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51036.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6777..6995
DNA (219bp) protein (73aa)
Uncharacterized protein n=18 Tax=Clostridium RepID=A8RS98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98095.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Predicted transcriptional regulator
L3_133_000M1_scaffold_272_10
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7181..8626
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Uncharacterized protein n=2 Tax=Clostridium RepID=R5FD37_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_133_000M1_scaffold_272_11
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8778..9443
DNA (666bp) protein (222aa)
AraC family transcriptional regulator n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z334_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ14442.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
two component transcriptional regulator, AraC family
L3_133_000M1_scaffold_272_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9786..10835
DNA (1050bp) protein (350aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RS94_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16475.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
dctP; putative TRAP C4-dicarboxylate transport system DctP subunit
L3_133_000M1_scaffold_272_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10819..11322
DNA (504bp) protein (168aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RS93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98099.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
dctQ; putative TRAP C4-dicarboxylate transport system DctQ subunit
L3_133_000M1_scaffold_272_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11319..12626
DNA (1308bp) protein (436aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RS92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16473.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
dctM; putative TRAP C4-dicarboxylate transport system permease
L3_133_000M1_scaffold_272_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13030..13941
DNA (912bp) protein (304aa)
Auxin efflux carrier protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YQY8_9CLOT
Auxin efflux carrier protein {ECO:0000313|EMBL:ENZ14438.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
auxin efflux carrier family protein
L3_133_000M1_scaffold_272_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14249..14410
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z330_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14437.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_272_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14497..14787
DNA (291bp) protein (97aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RS87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16468.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_133_000M1_scaffold_272_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14898..15254
DNA (357bp) protein (119aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RS86_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98104.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_133_000M1_scaffold_272_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15535..15684)
DNA (150bp) protein (50aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RS84_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16465.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_133_000M1_scaffold_272_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16149..16430
DNA (282bp) protein (94aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9YQY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14433.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_272_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17078..17311
DNA (234bp) protein (78aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z325_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51023.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17292..17729
DNA (438bp) protein (146aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XGD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14431.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_272_23
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17749..18102
DNA (354bp) protein (118aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XGR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51021.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18092..18391
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z1S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51020.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
histone family protein DNA-binding protein
L3_133_000M1_scaffold_272_25
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18899..20164
DNA (1266bp) protein (422aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YQY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51019.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_272_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20277..21131
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z320_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ14427.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_272_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21346..21942
DNA (597bp) protein (199aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XGD4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51017.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22042..22503
DNA (462bp) protein (154aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=3 Tax=Clostridium RepID=N9XGR2_9CLOT
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:ENZ51016.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_29
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22791..24383
DNA (1593bp) protein (531aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9Z1S2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51015.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_272_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24700..25320)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YQX9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ51014.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Displaying items 1-30 of 110 in total

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