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L3_133_000M1_scaffold_314

Search features with annotation key words

Displaying items 1-30 of 49 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_314_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(188..508)
DNA (321bp) protein (107aa)
UPF0145 protein PARMER_03121 n=4 Tax=Parabacteroides RepID=A7AI66_9PORP
UPF0145 protein PARMER_03121 {ECO:0000256|HAMAP-Rule:MF_00338}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000M1_scaffold_314_2
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(603..2864)
DNA (2262bp) protein (754aa)
Putative alpha-1 2-mannosidase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJS2_9PORP
Putative alpha-1 2-mannosidase {ECO:0000313|EMBL:CDD11383.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase
L3_133_000M1_scaffold_314_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3243..3638
DNA (396bp) protein (132aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AI69_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11385.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_314_4
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3652..3930
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Parabacteroides merdae RepID=A7AI70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85440.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000M1_scaffold_314_5
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3927..4553
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AI71_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85441.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
surface protein
L3_133_000M1_scaffold_314_6
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4986..8237)
DNA (3252bp) protein (1084aa)
WD40-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WWR5_9PORP
WD40-like protein {ECO:0000313|EMBL:CDD11389.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Tricorn-like protease
L3_133_000M1_scaffold_314_7
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8367..8942
DNA (576bp) protein (192aa)
RNA polymerase sigma-70 factor n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPV5_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:CDD11390.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_133_000M1_scaffold_314_8
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9164..10150
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZE25_9PORP
Sigma factor regulatory protein FecR/PupR family {ECO:0000313|EMBL:CDD11391.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Fe2+-dicitrate sensor, membrane component
L3_133_000M1_scaffold_314_9
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10202..13579
DNA (3378bp) protein (1126aa)
TonB-linked outer membrane protein SusC/RagA family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYU0_9PORP
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD11392.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
TonB-dependent receptor plug
L3_133_000M1_scaffold_314_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13603..15405
DNA (1803bp) protein (601aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJT4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11393.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_314_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15918..16328
DNA (411bp) protein (137aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6A1A2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11394.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000M1_scaffold_314_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16376..19615
DNA (3240bp) protein (1080aa)
WD40-like protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WPW1_9PORP
WD40-like protein {ECO:0000313|EMBL:CDD11395.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
putative exported tricorn protease
L3_133_000M1_scaffold_314_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19729..20253
DNA (525bp) protein (175aa)
Exonuclease n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X578_9PORP
Exonuclease {ECO:0000313|EMBL:CDD11396.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase III subunit epsilon
L3_133_000M1_scaffold_314_14
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20275..21462)
DNA (1188bp) protein (396aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=3 Tax=Parabacteroides merdae RepID=A7AI85_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09471.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
Na+/H+-dicarboxylate symporter
L3_133_000M1_scaffold_314_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21431..22897)
DNA (1467bp) protein (489aa)
Na+/H+ antiporter NhaC n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WJT9_9PORP
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:CDD11398.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Na+/H+ antiporter
L3_133_000M1_scaffold_314_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22990..23685)
DNA (696bp) protein (232aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
NAD-dependent protein deacylase n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K6A1A7_9PORP
NAD-dependent deacetylase
L3_133_000M1_scaffold_314_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23863..25332)
DNA (1470bp) protein (490aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5Z1R6_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDD11415.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_133_000M1_scaffold_314_18
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25344..26537)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XYW2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD11417.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
glycoside hydrolase 76
L3_133_000M1_scaffold_314_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26921..27508
DNA (588bp) protein (196aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=A7AI90_9PORP
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_133_000M1_scaffold_314_20
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27523..28248
DNA (726bp) protein (242aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
Peptidyl-prolyl cis-trans isomerase n=4 Tax=Parabacteroides RepID=A7AI91_9PORP
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_133_000M1_scaffold_314_21
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28419..28886
DNA (468bp) protein (156aa)
Transcriptional regulator, AsnC family n=4 Tax=Parabacteroides RepID=A7AI92_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN09479.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
transcriptional regulator
L3_133_000M1_scaffold_314_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28902..30353
DNA (1452bp) protein (484aa)
Peptidase S8/S53 family n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y4Z2_9PORP
Peptidase S8/S53 family {ECO:0000313|EMBL:CDD13462.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
subtilase family serine protease
L3_133_000M1_scaffold_314_23
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30334..31671
DNA (1338bp) protein (446aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
xseA; exodeoxyribonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XAU5_9PORP
L3_133_000M1_scaffold_314_24
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31702..31890
DNA (189bp) protein (63aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
Uncharacterized protein n=6 Tax=Parabacteroides RepID=A7AI95_9PORP
hypothetical protein
L3_133_000M1_scaffold_314_25
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31887..32585
DNA (699bp) protein (233aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2X2_9PORP
L3_133_000M1_scaffold_314_26
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32596..34692
DNA (2097bp) protein (699aa)
ATP-dependent DNA helicase RecG n=3 Tax=Parabacteroides RepID=A7AI97_9PORP
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EDN85467.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATP-dependent DNA helicase RecG
L3_133_000M1_scaffold_314_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34861..34962
DNA (102bp) protein (34aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K5ZE42_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13457.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
L3_133_000M1_scaffold_314_28
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34904..36148
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K6BQC6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD13456.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
M24/M37 family peptidase
L3_133_000M1_scaffold_314_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36291..36848
DNA (558bp) protein (186aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A7AIA1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN85471.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_133_000M1_scaffold_314_30
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36858..38132
DNA (1275bp) protein (425aa)
DoxX family protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X2W7_9PORP
DoxX family protein {ECO:0000313|EMBL:CDD13454.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
Displaying items 1-30 of 49 in total

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