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L3_133_000M1_scaffold_318

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_318_1
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

322..1548
DNA (1227bp) protein (409aa)
Integrase family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MDD9_9CLOT
Integrase family protein {ECO:0000313|EMBL:AJG98291.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
integrase
L3_133_000M1_scaffold_318_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1661..2002
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01902.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L3_133_000M1_scaffold_318_3
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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2077..3204
DNA (1128bp) protein (376aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX8_9FIRM
4Fe-4S ferredoxin {ECO:0000313|EMBL:KJF39477.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_133_000M1_scaffold_318_4
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3693..4817
DNA (1125bp) protein (375aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66325.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
periplasmic binding protein/LacI transcriptional regulator
L3_133_000M1_scaffold_318_5
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4912..6414
DNA (1503bp) protein (501aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX6_9FIRM
ABC transporter
L3_133_000M1_scaffold_318_6
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6427..7518
DNA (1092bp) protein (364aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66323.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_133_000M1_scaffold_318_7
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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7531..7929
DNA (399bp) protein (133aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66322.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_133_000M1_scaffold_318_8
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8070..8885
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KJF39481.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
hypothetical protein
L3_133_000M1_scaffold_318_9
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8998..9996)
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66320.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator, LacI family
L3_133_000M1_scaffold_318_10
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10209..12551
DNA (2343bp) protein (781aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
Phosphorylase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX1_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L3_133_000M1_scaffold_318_11
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12603..14387)
DNA (1785bp) protein (595aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66318.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
transcriptional regulator
L3_133_000M1_scaffold_318_12
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14588..15829
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66317.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_133_000M1_scaffold_318_13
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15873..17558
DNA (1686bp) protein (562aa)
esterase-like protein (EC:3.2.1.-)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66316.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_133_000M1_scaffold_318_14
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17555..19324
DNA (1770bp) protein (590aa)
PHB depolymerase family esterase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW7_9FIRM
PHB depolymerase family esterase {ECO:0000313|EMBL:EHL66315.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
poly(3-hydroxybutyrate) depolymerase
L3_133_000M1_scaffold_318_15
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19464..20738
DNA (1275bp) protein (425aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW6_9FIRM
Membrane transport protein {ECO:0000313|EMBL:KJF39488.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
transporter
L3_133_000M1_scaffold_318_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20825..21961
DNA (1137bp) protein (379aa)
Alcohol dehydrogenase (EC:1.1.1.1)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66313.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
L3_133_000M1_scaffold_318_17
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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21982..22881
DNA (900bp) protein (300aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW4_9FIRM
dihydrodipicolinate synthese family protein
L3_133_000M1_scaffold_318_18
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22885..23952
DNA (1068bp) protein (356aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW3_9FIRM
L3_133_000M1_scaffold_318_19
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23966..25123
DNA (1158bp) protein (386aa)
Putative uncharacterized protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RWW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL66310.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
L3_133_000M1_scaffold_318_20
unknown

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25505..25621
DNA (117bp) protein (39aa)

This feature has no annotations

L3_133_000M1_scaffold_318_21
Veillonella sp. CAG:933, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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26173..26850
DNA (678bp) protein (226aa)
FCD domain protein n=1 Tax=Veillonella sp. CAG:933 RepID=R5BFU1_9FIRM
FCD domain protein {ECO:0000313|EMBL:CCX54243.1}; TaxID=1262980 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella; environmental samples.;" source="Veillonella sp. CAG:933.;"
GntR; transcriptional regulator
L3_133_000M1_scaffold_318_22
Clostridium sp. KLE 1755, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27090..29075
DNA (1986bp) protein (662aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2B4T8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67225.1}; TaxID=1226325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. KLE 1755.;"
hypothetical protein
L3_133_000M1_scaffold_318_23
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

29134..30390
DNA (1257bp) protein (419aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4D6_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK81677.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_133_000M1_scaffold_318_24
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30393..31937
DNA (1545bp) protein (515aa)
FdrA family protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4D5_SPISS
Uncharacterized protein {ECO:0000313|EMBL:KJF38972.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
FdrA family protein
L3_133_000M1_scaffold_318_25
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

31934..32116
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4D4_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK81675.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
L3_133_000M1_scaffold_318_26
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

32140..33333
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228).;"
Acetate kinase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R4D1_SPISS
acetate kinase
L3_133_000M1_scaffold_318_27
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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33299..34390
DNA (1092bp) protein (364aa)
Alpha/beta hydrolase fold-3 domain-containing protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NKY2_9BACL
alpha/beta hydrolase
Alpha/beta hydrolase fold-3 domain-containing protein {ECO:0000313|EMBL:AFC29288.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
L3_133_000M1_scaffold_318_28
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34423..35304
DNA (882bp) protein (294aa)
2-hydroxy-3-oxopropionate reductase n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LJP7_9FIRM
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:EOS58768.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
2-hydroxy-3-oxopropionate reductase
L3_133_000M1_scaffold_318_29
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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35507..36760
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9N5S2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS78296.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
MFS transporter
L3_133_000M1_scaffold_318_30
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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36762..37772
DNA (1011bp) protein (337aa)
Oxidoreductase, FAD/FMN-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5C9_9FIRM
Oxidoreductase, FAD/FMN-binding protein {ECO:0000313|EMBL:EEF68804.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
NADH oxidase
Displaying items 1-30 of 39 in total

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