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L3_133_000M1_scaffold_338

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_338_1
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(143..2479)
DNA (2337bp) protein (779aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y5I9_9FIRM
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDA20064.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
L3_133_000M1_scaffold_338_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2655..3299)
DNA (645bp) protein (215aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXQ8_9FIRM
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:CDB42683.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
CDP-alcohol phosphatidyltransferase
L3_133_000M1_scaffold_338_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3361..4128)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I874_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42684.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_133_000M1_scaffold_338_4
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4247..5419)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YFJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA20061.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L3_133_000M1_scaffold_338_5
Ethanoligenens harbinense, Ethanoligenens, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5489..6223)
DNA (735bp) protein (245aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=663278 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ethanoligenens.;" source="Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033; / YUAN-3).;"
tRNA pseudouridine synthase A n=1 Tax=Ethanoligenens harbinense (strain DSM 18485 / JCM 12961 / CGMCC 1.5033 / YUAN-3) RepID=E6U473_ETHHY
tRNA pseudouridine synthase A
L3_133_000M1_scaffold_338_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6265..7080)
DNA (816bp) protein (272aa)
Cobalt transport protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IXF9_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:CDB42687.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
cobalt transport protein
L3_133_000M1_scaffold_338_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7074..7946)
DNA (873bp) protein (291aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Cobalt ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HXR1_9FIRM
ABC transporter
L3_133_000M1_scaffold_338_8
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8517..9368)
DNA (852bp) protein (284aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Energy-coupling factor transporter ATP-binding protein EcfA 2 n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MFH3_9FIRM
cobalt transport protein ATP-binding subunit
L3_133_000M1_scaffold_338_9
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9391..10269)
DNA (879bp) protein (293aa)
Methyltransferase domain protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DWE3_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:CDA91930.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
Predicted SAM-dependent methyltransferases
L3_133_000M1_scaffold_338_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10273..11622)
DNA (1350bp) protein (450aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphoglucosamine mutase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IB91_9FIRM
phosphoglucosamine mutase
L3_133_000M1_scaffold_338_11
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11699..12727)
DNA (1029bp) protein (343aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
ruvB; Holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y5I0_9FIRM
L3_133_000M1_scaffold_338_12
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12747..13241)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KE64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36936.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
N-acetyltransferase GCN5
L3_133_000M1_scaffold_338_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13310..13918)
DNA (609bp) protein (203aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
Holliday junction ATP-dependent DNA helicase RuvA n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MZL6_9FIRM
Holliday junction DNA helicase RuvA
L3_133_000M1_scaffold_338_14
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13915..14427)
DNA (513bp) protein (171aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
ruvC; Crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MFE9_9FIRM
L3_133_000M1_scaffold_338_15
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14877..16031)
DNA (1155bp) protein (385aa)
Germination protein Ger(X)C family n=1 Tax=Clostridium leptum CAG:27 RepID=R6N8V3_9CLOT
Germination protein Ger(X)C family {ECO:0000313|EMBL:CDC04794.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
germination protein, Ger(X)C family
L3_133_000M1_scaffold_338_16
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16028..17122)
DNA (1095bp) protein (365aa)
Spore germination protein (Amino acid permease) n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3G6_9FIRM
Spore germination protein (Amino acid permease) {ECO:0000313|EMBL:CCY92121.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
putative membrane protein
L3_133_000M1_scaffold_338_17
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17153..18691)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N4L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92122.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
GerA spore germination protein
L3_133_000M1_scaffold_338_18
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19045..19740
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DPZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89695.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
hypothetical protein
L3_133_000M1_scaffold_338_19
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19843..20223
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MK68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY92125.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_133_000M1_scaffold_338_20
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20257..20646)
DNA (390bp) protein (130aa)
Glycerol-3-phosphate cytidylyltransferase (EC:2.7.7.39)
Uncharacterized protein n=2 Tax=Blautia RepID=R5BWQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX58664.1}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
L3_133_000M1_scaffold_338_21
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

comp(20650..21471)
DNA (822bp) protein (274aa)
LicD family protein id=2005857 bin=GWE2_Firmicute_51_13 species=Clostridium perfringens genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
licD family protein
Tax=GWF2_Firmicutes_51_9_curated
L3_133_000M1_scaffold_338_22
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21528..22937)
DNA (1410bp) protein (470aa)
Polysaccharide transporter n=1 Tax=Clostridium intestinale URNW RepID=U2Q793_9CLOT
Polysaccharide transporter {ECO:0000313|EMBL:ERK32019.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
polysaccharide transporter
L3_133_000M1_scaffold_338_23
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22934..24418)
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJ79_SYNLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI00968.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
L3_133_000M1_scaffold_338_24
Desulfosporosinus sp. Tol-M, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24439..25707)
DNA (1269bp) protein (423aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis CAG:47 RepID=R6YS41_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KGP75328.1}; TaxID=1536651 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. Tol-M.;"
hypothetical protein
L3_133_000M1_scaffold_338_25
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25750..26949)
DNA (1200bp) protein (400aa)
Group 1 glycosyl transferase {ECO:0000313|EMBL:CEO09855.1}; EC=2.4.1.21 {ECO:0000313|EMBL:CEO09855.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
Glycosyltransferase n=4 Tax=Bacillus cereus RepID=C2SBT4_BACCE
glycosyl transferase
L3_133_000M1_scaffold_338_26
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

Not on your lists

comp(26950..28074)
DNA (1125bp) protein (375aa)
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RXP8_SPHGB
Tax=BJP_08E140C01_Spirochaeta_53_29
L3_133_000M1_scaffold_338_27
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28097..29206)
DNA (1110bp) protein (370aa)
Capsular polysaccharide biosynthesis protein Cap8F n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I7C0_9CLOT
Capsular biosynthesis protein {ECO:0000313|EMBL:KEZ88742.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
NAD-dependent epimerase/dehydratase
L3_133_000M1_scaffold_338_28
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29207..30229)
DNA (1023bp) protein (341aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AIF53694.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AIF53694.1};; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. UFO1.;"
Polysaccharide biosynthesis protein CapD n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KI06_CLOPH
L3_133_000M1_scaffold_338_29
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30205..31437)
DNA (1233bp) protein (411aa)
Capsular polysaccharide biosynthesis protein Cps4F n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GR52_EUBLK
capsular polysaccharide biosynthesis protein Cps4F
Capsular polysaccharide biosynthesis protein Cps4F {ECO:0000313|EMBL:ADO39494.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_133_000M1_scaffold_338_30
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

31775..32011
DNA (237bp) protein (79aa)
Putative uncharacterized protein id=3086145 bin=GWF2_Clostridiales_36_10 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
FeoA family protein
Tax=GWF2_Clostridiales_36_10_curated
Displaying items 1-30 of 44 in total

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