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L3_133_000M1_scaffold_448

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_448_1
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2..802
DNA (801bp) protein (267aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4H0_BIFAD
guaB; inosine-5'-monophosphate dehydrogenase
L3_133_000M1_scaffold_448_2
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(966..2000)
DNA (1035bp) protein (345aa)
Probable LacI-type transcriptional regulator n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5H191_9BIFI
LacI family transcriptional regulator {ECO:0000313|EMBL:KIM02048.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
LacI-type transcriptional regulator
L3_133_000M1_scaffold_448_3
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2317..4089
DNA (1773bp) protein (591aa)
Alpha-glucosidase n=2 Tax=Bifidobacterium adolescentis RepID=Q93CA0_BIFAD
Alpha-glucosidase {ECO:0000313|EMBL:AAL05573.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
aglA; alpha-1,4-glucosidase
L3_133_000M1_scaffold_448_4
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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4328..4981
DNA (654bp) protein (218aa)
Oligoribonuclease n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMV0_9BIFI
Oligoribonuclease {ECO:0000313|EMBL:KIM02046.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
orn; oligoribonuclease
L3_133_000M1_scaffold_448_5
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5009..5908
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GS14_9BIFI
putative sugar-phosphatase
Uncharacterized protein {ECO:0000313|EMBL:CCY18529.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_133_000M1_scaffold_448_6
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5953..7368
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMB0_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY18530.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
helicase
L3_133_000M1_scaffold_448_7
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


7959..9767
DNA (1809bp) protein (603aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00089874};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Proline--tRNA ligase n=2 Tax=Bifidobacterium adolescentis RepID=SYP_BIFAA
prolyl-tRNA synthetase
L3_133_000M1_scaffold_448_8
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10161..10739
DNA (579bp) protein (193aa)
Single-stranded DNA-binding protein n=2 Tax=Bifidobacterium RepID=A1A0K5_BIFAA
hypothetical protein
Single-strand binding protein {ECO:0000313|EMBL:AII75897.1}; Uncharacterized protein {ECO:0000313|EMBL:AJE05469.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_9
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10778..12868)
DNA (2091bp) protein (697aa)
Peptidase family M13 {ECO:0000313|EMBL:EDN83813.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDN83813.1};; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Peptidase family M13 n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I0_BIFAD
belongs to peptidase family M13
L3_133_000M1_scaffold_448_10
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12999..13772
DNA (774bp) protein (258aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
Methionine aminopeptidase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I1_BIFAD
methionine aminopeptidase
L3_133_000M1_scaffold_448_11
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13913..15208
DNA (1296bp) protein (432aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
Citrate synthase n=1 Tax=Bifidobacterium adolescentis L2-32 RepID=A7A4I2_BIFAD
citrate synthase 1
L3_133_000M1_scaffold_448_12
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15350..16342
DNA (993bp) protein (331aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; EC=2.3.1.117 {ECO:0000256|HAMAP-Rule:MF_02122};; Tetrahydrodipicolinate N-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_02122}; Tetrahydropicolinate succinylase {ECO:0000256|HAMAP-Rule:MF_02122}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=3 Tax=Bifidobacterium RepID=A1A0K9_BIFAA
hypothetical protein
L3_133_000M1_scaffold_448_13
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16350..16871
DNA (522bp) protein (174aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=411481 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis L2-32.;"
Ribosomal RNA large subunit methyltransferase H n=2 Tax=Bifidobacterium RepID=A7A4I5_BIFAD
rRNA large subunit methyltransferase
L3_133_000M1_scaffold_448_14
unknown

Not on your lists

comp(16719..17201)
DNA (483bp) protein (161aa)

This feature has no annotations

L3_133_000M1_scaffold_448_15
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(17212..17754)
DNA (543bp) protein (181aa)
Uncharacterised protein {ECO:0000313|EMBL:CRH72866.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_133_000M1_scaffold_448_16
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17786..18262
DNA (477bp) protein (159aa)
Peptide chain release factor 2 n=3 Tax=Bifidobacterium RepID=A1A0L1_BIFAA
peptide chain release factor 2
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_17
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18286..19524
DNA (1239bp) protein (413aa)
FtsE-like ATP binding protein in cell division n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMW2_9BIFI
FtsE-like ATP binding protein in cell division {ECO:0000313|EMBL:CCY18543.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
FtsE-like ATP binding protein in cell division
L3_133_000M1_scaffold_448_18
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19524..20447
DNA (924bp) protein (308aa)
Cell division protein FtsX n=2 Tax=Bifidobacterium adolescentis RepID=A1A0L3_BIFAA
FtsX-like protein in cell division
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_19
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20535..21959
DNA (1425bp) protein (475aa)
Uncharacterized protein n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0L4_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF39247.1}; TaxID=367928 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC; 11814 / E194a).;"
L3_133_000M1_scaffold_448_20
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22088..22567
DNA (480bp) protein (160aa)
SsrA-binding protein n=3 Tax=Bifidobacterium RepID=SSRP_BIFAA
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_133_000M1_scaffold_448_21
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22694..23641
DNA (948bp) protein (316aa)
ABC transporter, substrate-binding protein, family 3 n=2 Tax=Bifidobacterium RepID=A7A4J3_BIFAD
ABC transporter solute-binding protein
ABC transporter solute-binding protein {ECO:0000313|EMBL:AII75909.1}; ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM02033.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_22
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23752..24687
DNA (936bp) protein (312aa)
Probable solute binding protein of ABC transporter system n=2 Tax=Bifidobacterium RepID=A1A0L7_BIFAA
ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIM02032.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_23
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24875..25804
DNA (930bp) protein (310aa)
Probable solute binding protein of ABC transporter system n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0L8_BIFAA
putative solute binding protein of ABC transporter system
Putative solute binding protein of ABC transporter system {ECO:0000313|EMBL:AJE05484.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_24
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25839..26822
DNA (984bp) protein (328aa)
Permease protein of ABC transporter system n=3 Tax=Bifidobacterium RepID=A1A0L9_BIFAA
permease protein of ABC transporter system
Permease protein of ABC transporter system {ECO:0000313|EMBL:AII75912.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_25
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26834..27628
DNA (795bp) protein (265aa)
ATP binding protein of ABC transporter n=2 Tax=Bifidobacterium RepID=A1A0M0_BIFAA
ABC transporter ATP-binding protein
ATP binding protein of ABC transporter {ECO:0000313|EMBL:CCY18551.1}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
L3_133_000M1_scaffold_448_26
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27858..29750
DNA (1893bp) protein (631aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
glmS; glucosamine--fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=A1A0M1_BIFAA
L3_133_000M1_scaffold_448_27
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29770..30495
DNA (726bp) protein (242aa)
Pseudouridine synthase n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMX1_9BIFI
pseudouridine synthase
Pseudouridine synthase {ECO:0000313|EMBL:AII75915.1}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_28
Bifidobacterium adolescentis, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30604..31896
DNA (1293bp) protein (431aa)
Serine/threonine transporter SstT n=1 Tax=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083 / NCTC 11814 / E194a) RepID=SSTT_BIFAA
transport protein
Serine/threonine transporter SstT {ECO:0000256|HAMAP-Rule:MF_01582, ECO:0000256|SAAS:SAAS00015301}; Na(+)/serine-threonine symporter {ECO:0000256|HAMAP-Rule:MF_01582}; TaxID=1680 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium adolescentis.;"
L3_133_000M1_scaffold_448_29
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32093..33520
DNA (1428bp) protein (476aa)
ABC transporter solute-binding protein n=1 Tax=Bifidobacterium adolescentis CAG:119 RepID=R5GMC6_9BIFI
Sugar ABC transporter solute-binding protein {ECO:0000313|EMBL:KFI96656.1}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris.;"
putative solute binding protein of ABC transporter system for sugars
L3_133_000M1_scaffold_448_30
Bifidobacterium adolescentis CAG:119, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33634..34404)
DNA (771bp) protein (257aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263057 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium adolescentis CAG:119.;"
Type III pantothenate kinase n=2 Tax=Bifidobacterium RepID=A7A4L3_BIFAD
pantothenate kinase
Displaying items 1-30 of 50 in total

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