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L3_133_000M1_scaffold_540

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Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_540_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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145..624
DNA (480bp) protein (160aa)
Ribonuclease H {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437}; Short=RNase H {ECO:0000256|HAMAP-Rule:MF_00042};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00042, ECO:0000256|SAAS:SAAS00016437};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease H n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZE5_9FIRM
L3_133_000M1_scaffold_540_2
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1035..2261
DNA (1227bp) protein (409aa)
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Tyrosine--tRNA ligase n=2 Tax=Clostridiales RepID=D4LGV0_9FIRM
L3_133_000M1_scaffold_540_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2348..4990
DNA (2643bp) protein (881aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYK3_9FIRM
L3_133_000M1_scaffold_540_4
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5045..5338
DNA (294bp) protein (98aa)
30S ribosomal protein S21 n=1 Tax=Blautia sp. KLE 1732 RepID=U2DL38_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
L3_133_000M1_scaffold_540_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5373..6947
DNA (1575bp) protein (525aa)
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2EQR2_9FIRM
Phosphatidylserine/phosphatidylglycerophosphate/c ardiolipin synthases and related enzymes {ECO:0000313|EMBL:CCY96852.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7049..8476
DNA (1428bp) protein (476aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZF0_9FIRM
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_133_000M1_scaffold_540_7
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8667..8978
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96854.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_540_8
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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9015..11573
DNA (2559bp) protein (853aa)
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYK9_9FIRM
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:CCY96855.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_9
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11716..12225
DNA (510bp) protein (170aa)
TspO/MBR family protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHN8_9FIRM
TspO/MBR family protein {ECO:0000313|EMBL:CCY96856.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
TspO and MBR-like protein
L3_133_000M1_scaffold_540_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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12425..13837
DNA (1413bp) protein (471aa)
Amidophosphoribosyltransferase {ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|PIRNR:PIRNR000485}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIB8_9FIRM
L3_133_000M1_scaffold_540_11
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13912..14526)
DNA (615bp) protein (205aa)
Fibronectin type III domain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZF5_9FIRM
Fibronectin type III domain {ECO:0000313|EMBL:CCY96858.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Fibronectin type III domain.
L3_133_000M1_scaffold_540_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14772..15026
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4J5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96859.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
aconitate hydratase
L3_133_000M1_scaffold_540_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15029..15274
DNA (246bp) protein (82aa)
citrate lyase, alpha subunit (EC:4.1.3.6)
Citrate lyase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYL3_9FIRM
Citrate lyase {ECO:0000313|EMBL:CCY96860.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15341..16465
DNA (1125bp) protein (375aa)
citrate lyase, alpha subunit (EC:4.1.3.6)
Citrate lyase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHP4_9FIRM
Citrate lyase {ECO:0000313|EMBL:CCY96861.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16897..17772
DNA (876bp) protein (292aa)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase {ECO:0000256|HAMAP-Rule:MF_00397}; Short=2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase {ECO:0000256|HAMAP-Rule:MF_00397};; EC=2.4.2.52 {ECO:0000256|HAMAP-Rule:MF_00397};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
triphosphoribosyl-dephospho-CoA synthase CitG (EC:2.7.8.25)
Probable 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZG1_9FIRM
L3_133_000M1_scaffold_540_16
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17980..18180
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GIM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY17058.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
L3_133_000M1_scaffold_540_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18153..18881
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96865.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_540_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18991..19671
DNA (681bp) protein (227aa)
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHP9_9FIRM
Haloacid dehalogenase superfamily subfamily IA variant 3 with third motif having DD or ED {ECO:0000313|EMBL:CCY96866.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
L3_133_000M1_scaffold_540_19
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19668..20471
DNA (804bp) protein (268aa)
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NIC7_9FIRM
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:CCY96867.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_20
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20476..22266
DNA (1791bp) protein (597aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Xaa-Pro aminopeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZG7_9FIRM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:CCY96868.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_21
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22371..22874
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4K3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96869.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_540_22
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22826..23134
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96870.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_540_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23310..24308
DNA (999bp) protein (333aa)
adenosine deaminase (EC:3.5.4.4)
Adenosine deaminase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHQ6_9FIRM
Adenosine deaminase {ECO:0000313|EMBL:CCY96871.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24345..24917
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NID2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96872.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Transcriptional regulator
L3_133_000M1_scaffold_540_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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25067..26470
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MZH2_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CCY96873.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
amino acid carrier protein
L3_133_000M1_scaffold_540_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26647..27180
DNA (534bp) protein (178aa)
O-6-methylguanine DNA methyltransferase (EC:2.1.1.63)
O-6-methylguanine DNA methyltransferase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4K9_9FIRM
O-6-methylguanine DNA methyltransferase {ECO:0000313|EMBL:CCY96874.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_540_27
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27323..30022
DNA (2700bp) protein (900aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5MYN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY96875.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DEAD/DEAH box helicase
L3_133_000M1_scaffold_540_28
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30009..32099
DNA (2091bp) protein (697aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NHQ8_9FIRM
UvrD/REP helicase
L3_133_000M1_scaffold_540_29
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32441..34606
DNA (2166bp) protein (722aa)
Signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NID6_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CCY96877.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Signal transduction histidine kinase
L3_133_000M1_scaffold_540_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34672..35424
DNA (753bp) protein (251aa)
GTP pyrophosphokinase n=1 Tax=Ruminococcus sp. JC304 RepID=UPI000314FFEE
Uncharacterized protein {ECO:0000313|EMBL:CDD78762.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy