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L3_133_000M1_scaffold_580

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_580_1
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(406..720)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7LZ20_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN10278.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
deaminase
L3_133_000M1_scaffold_580_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(841..1080)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:EYA20175.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
L3_133_000M1_scaffold_580_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1118..2401)
DNA (1284bp) protein (428aa)
Site-specific recombinase, phage integrase family n=7 Tax=Bacteroidales RepID=B0MZE0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EYA20176.1}; TaxID=1339337 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 1007-1-F #3.;"
hypothetical protein
L3_133_000M1_scaffold_580_4
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2947..3321
DNA (375bp) protein (125aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=C3RD52_9BACE
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EOS12315.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_133_000M1_scaffold_580_5
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3268..4038)
DNA (771bp) protein (257aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6Z6W0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EET16619.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
hypothetical protein
L3_133_000M1_scaffold_580_6
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4093..4239
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HI65_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY76382.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_133_000M1_scaffold_580_7
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4449..6746)
DNA (2298bp) protein (766aa)
Glutamate synthase (NADPH) homotetrameric n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4Q0_9BACE
Glutamate synthase (NADPH) homotetrameric {ECO:0000313|EMBL:CDF19243.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
bifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta
L3_133_000M1_scaffold_580_8
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6929..8146)
DNA (1218bp) protein (406aa)
Glucose/galactose transporter warning n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P4J6_9BACE
Glucose/galactose transporter warning {ECO:0000313|EMBL:CDF19242.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
sugar transporter
L3_133_000M1_scaffold_580_9
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8160..8276
DNA (117bp) protein (39aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=G1UMI0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS04650.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_000M1_scaffold_580_10
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8287..9561)
DNA (1275bp) protein (425aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Seryl-tRNA synthetase n=6 Tax=Bacteroides RepID=A6L6D5_BACV8
Seryl-tRNA synthetase {ECO:0000313|EMBL:ABR41249.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_133_000M1_scaffold_580_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9681..10253
DNA (573bp) protein (191aa)
Nicotinamide mononucleotide transporter PnuC n=5 Tax=Bacteroides RepID=C6Z6V6_9BACE
membrane transporter involved in nicotinamide mononucleotide transport
Nicotinamide mononucleotide transporter PnuC {ECO:0000313|EMBL:EIY76377.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
L3_133_000M1_scaffold_580_12
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10240..10875
DNA (636bp) protein (212aa)
Thiamine diphosphokinase n=4 Tax=Bacteroides RepID=C6Z6V5_9BACE
Thiamine pyrophosphokinase {ECO:0000313|EMBL:EOS04647.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
thiamine pyrophosphokinase
L3_133_000M1_scaffold_580_13
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(10932..11195)
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=7 Tax=Bacteroides RepID=RL27_BACV8
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
L3_133_000M1_scaffold_580_14
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(11217..11534)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=12 Tax=Bacteroides RepID=RL21_BACV8
50S ribosomal protein L21
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
L3_133_000M1_scaffold_580_15
Bacteroides vulgatus CAG:6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11748..13817)
DNA (2070bp) protein (690aa)
HAD hydrolase family IA n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7NZL9_9BACE
HAD hydrolase family IA {ECO:0000313|EMBL:CDF18924.1}; TaxID=1263056 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides vulgatus CAG:6.;"
HPr(Ser) phosphatase
L3_133_000M1_scaffold_580_16
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13873..14385)
DNA (513bp) protein (171aa)
Lipoprotein n=2 Tax=Bacteroides RepID=E5UTG4_9BACE
Lipoprotein {ECO:0000313|EMBL:EFV67573.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
hypothetical protein
L3_133_000M1_scaffold_580_17
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14382..15089)
DNA (708bp) protein (236aa)
ABC transporter, ATP-binding protein n=4 Tax=Bacteroides RepID=C6Z6V0_9BACE
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET16609.2}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
ATP-binding protein
L3_133_000M1_scaffold_580_18
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15102..16589)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8ZLH1_BACVU
Uncharacterized protein {ECO:0000313|EMBL:EIY76370.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
hypothetical protein
L3_133_000M1_scaffold_580_19
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16599..18977)
DNA (2379bp) protein (793aa)
Putative zinc protease n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6C6_BACV8
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KDS32756.1}; TaxID=1339350 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3775 SL(B) 10 (iv).;"
zinc protease
L3_133_000M1_scaffold_580_20
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18949..19353)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I9IRV1_BACVU
zinc protease
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:KDS56127.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
L3_133_000M1_scaffold_580_21
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19384..20331)
DNA (948bp) protein (316aa)
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
Thioredoxin reductase n=9 Tax=Bacteroides RepID=A6L6C5_BACV8
thioredoxin reductase
L3_133_000M1_scaffold_580_22
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20401..21015)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CL09T03C04 RepID=I8ZN07_BACVU
Outer membrane lipocarrier LolA family protein {ECO:0000313|EMBL:KDS56125.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_133_000M1_scaffold_580_23
Bacteroides sp. 3_1_40A, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21032..23497)
DNA (2466bp) protein (822aa)
FtsK/SpoIIIE family cell division protein n=5 Tax=Bacteroides RepID=A6L6C3_BACV8
FtsK/SpoIIIE family cell division protein {ECO:0000313|EMBL:EFV67579.1}; TaxID=469593 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_40A.;"
FtsK/SpoIIIE family cell division protein
L3_133_000M1_scaffold_580_24
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23602..24165
DNA (564bp) protein (188aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6C2_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOS04636.1}; TaxID=1235786 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus dnLKV7.;"
L3_133_000M1_scaffold_580_25
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24162..24812
DNA (651bp) protein (217aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9IRU6_BACVU
3'-5' exonuclease family protein {ECO:0000313|EMBL:KDS56122.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
hypothetical protein
L3_133_000M1_scaffold_580_26
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24802..25986
DNA (1185bp) protein (395aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A6L6C0_BACV8
hypothetical protein
Putative 23S rRNA m5C1962 methyltransferase {ECO:0000313|EMBL:EET16601.1}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
L3_133_000M1_scaffold_580_27
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26639..27427)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus CAG:6 RepID=R7P3Q5_9BACE
Methyltransferase domain protein {ECO:0000313|EMBL:KDS56120.1}; TaxID=1339352 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus str. 3975 RP4.;"
3-demethylubiquinone-9 3-methyltransferase
L3_133_000M1_scaffold_580_28
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27483..28721)
DNA (1239bp) protein (413aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L6B8_BACV8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:ABR41232.1}; TaxID=435590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154).;"
L3_133_000M1_scaffold_580_29
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28718..29263)
DNA (546bp) protein (182aa)
Sigma-70 region 2 n=6 Tax=Bacteroides RepID=C6Z6T9_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EIY76360.1}; TaxID=997891 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus CL09T03C04.;"
RNA polymerase ECF-type sigma factor
L3_133_000M1_scaffold_580_30
Bacteroides sp. 4_3_47FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29898..31031
DNA (1134bp) protein (378aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=457394 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_3_47FAA.;"
Aldose 1-epimerase n=2 Tax=Bacteroides RepID=E5UTH8_9BACE
aldose epimerase
Displaying items 1-30 of 73 in total

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