ggKbase home page

L3_133_000M1_scaffold_640

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_640_1
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..277
DNA (276bp) protein (92aa)
Putative SAM-dependent methyltransferase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z1Q6_9BACT
Putative SAM-dependent methyltransferase {ECO:0000313|EMBL:CDD24402.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Predicted SAM-dependent methyltransferases
L3_133_000M1_scaffold_640_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

290..577
DNA (288bp) protein (96aa)
Conserved domain protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL79_9BACT
Conserved domain protein {ECO:0000313|EMBL:CDD24403.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_133_000M1_scaffold_640_3
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(542..1261)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XZC4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD24404.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_133_000M1_scaffold_640_4
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1292..1864)
DNA (573bp) protein (191aa)
chromate transporter n=1 Tax=Alistipes onderdonkii RepID=UPI000368F026
Chromate transport protein ChrA {ECO:0000313|EMBL:CDD24405.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chromate transport protein ChrA
L3_133_000M1_scaffold_640_5
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1861..2403)
DNA (543bp) protein (181aa)
Chromate transport protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y6X9_9BACT
Chromate transport protein {ECO:0000313|EMBL:CDD24406.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
chromate transport protein ChrA
L3_133_000M1_scaffold_640_6
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2494..3213)
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
16S rRNA methyltransferase n=1 Tax=Alistipes onderdonkii RepID=UPI00036A543A
RsmE family RNA methyltransferase
L3_133_000M1_scaffold_640_7
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3352..5487
DNA (2136bp) protein (712aa)
peptidyl-dipeptidase Dcp (EC:3.4.15.5)
Putative peptidyl-dipeptidase dcp n=1 Tax=Alistipes sp. CAG:29 RepID=R6XL82_9BACT
Putative peptidyl-dipeptidase dcp {ECO:0000313|EMBL:CDD24408.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
L3_133_000M1_scaffold_640_8
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5525..7645
DNA (2121bp) protein (707aa)
Peptidase family M3 {ECO:0000313|EMBL:EFR56775.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR56775.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
peptidase M3 n=1 Tax=Alistipes onderdonkii RepID=UPI000378F118
Zn-dependent oligopeptidase
L3_133_000M1_scaffold_640_9
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7950..9212
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000360C136
Site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:CBK65012.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9255..9557)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ01_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65013.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9559..9840)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ02_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65014.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_12
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10349..11599)
DNA (1251bp) protein (417aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ03_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65015.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11648..13588)
DNA (1941bp) protein (647aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000364CDDB
Uncharacterized protein {ECO:0000313|EMBL:CBK65016.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_133_000M1_scaffold_640_14
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13600..13797)
DNA (198bp) protein (66aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ05_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65017.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13809..14699)
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ06_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65018.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_16
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14702..16360)
DNA (1659bp) protein (553aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00035C8793
Uncharacterized protein {ECO:0000313|EMBL:EFR57244.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
OmpA family
L3_133_000M1_scaffold_640_17
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16363..16917)
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037F461F
Uncharacterized protein {ECO:0000313|EMBL:EFR57107.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_133_000M1_scaffold_640_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16938..19547)
DNA (2610bp) protein (870aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ07_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK65019.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein
L3_133_000M1_scaffold_640_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19622..20452)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037B57F0
Protein of unknown function (DUF1812).
Uncharacterized protein {ECO:0000313|EMBL:CBK64281.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20462..20644)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ08_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65020.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_21
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20869..21468)
DNA (600bp) protein (200aa)
RteC protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ09_9BACT
RteC protein.
RteC protein {ECO:0000313|EMBL:CBK65021.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22037..23017)
DNA (981bp) protein (327aa)
Glycosyl hydrolases family 18 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ10_9BACT
Glycosyl hydrolases family 18.
Glycosyl hydrolases family 18 {ECO:0000313|EMBL:CBK65022.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_23
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23156..24790)
DNA (1635bp) protein (545aa)
Glycosyl hydrolases family 18 n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ11_9BACT
Glycosyl hydrolases family 18.
Glycosyl hydrolases family 18 {ECO:0000313|EMBL:CBK65023.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_24
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24793..26157)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003660D7D
Putative lipoprotein {ECO:0000313|EMBL:CDC97863.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Domain of unknown function (DUF1735).
L3_133_000M1_scaffold_640_25
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26166..27062)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ12_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65024.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27089..28681)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI0003720070
Uncharacterized protein {ECO:0000313|EMBL:EFR58025.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein
L3_133_000M1_scaffold_640_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28694..32029)
DNA (3336bp) protein (1112aa)
membrane protein n=1 Tax=Alistipes onderdonkii RepID=UPI000379ECDE
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDC97854.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
SusC/RagA family TonB-linked outer membrane protein
L3_133_000M1_scaffold_640_28
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32207..33154)
DNA (948bp) protein (316aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ13_9BACT
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:CBK65025.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35252..35566
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI00037EE9ED
ORF6N domain.
ORF6N domain {ECO:0000313|EMBL:CBK65026.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_133_000M1_scaffold_640_30
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35559..35759
DNA (201bp) protein (67aa)
ORF6N domain n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ14_9BACT
ORF6N domain.
ORF6N domain {ECO:0000313|EMBL:CBK65026.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Displaying items 1-30 of 46 in total

View Taxonomy