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L3_133_000M1_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_813_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

487..1590
DNA (1104bp) protein (368aa)
riboflavin biosynthesis protein RibD (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z7S1_9CLOT
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_813_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1572..2252
DNA (681bp) protein (227aa)
Riboflavin synthase, alpha subunit n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWX3_9CLOT
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:ENZ16538.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
riboflavin synthase alpha subunit
L3_133_000M1_scaffold_813_3
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2344..3561
DNA (1218bp) protein (406aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z8Y0_9CLOT
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
GTP cyclohydrolase II
L3_133_000M1_scaffold_813_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3631..4158
DNA (528bp) protein (176aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XMG9_9CLOT
6,7-dimethyl-8-ribityllumazine synthase
L3_133_000M1_scaffold_813_5
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4167..7049)
DNA (2883bp) protein (961aa)
PAS domain S-box protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XMV4_9CLOT
PAS domain S-box protein {ECO:0000313|EMBL:ENZ16535.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
two-component system sensor histidine kinase
L3_133_000M1_scaffold_813_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7180..8895)
DNA (1716bp) protein (572aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z7R4_9CLOT
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENZ16534.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
two-component sensor histidine kinase
L3_133_000M1_scaffold_813_7
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8984..9145)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9YWW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98749.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_133_000M1_scaffold_813_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9142..9762)
DNA (621bp) protein (207aa)
Phosphoglycerate mutase n=4 Tax=Clostridium RepID=N9Z8X5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98750.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
phosphoglycerate mutase
L3_133_000M1_scaffold_813_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9784..10827)
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase n=2 Tax=Clostridium RepID=N9XMG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98751.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
alcohol dehydrogenase GroES domain-containing protein
L3_133_000M1_scaffold_813_10
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10893..12377)
DNA (1485bp) protein (495aa)
glpK3; glycerol kinase 1 (EC:2.7.1.30)
Glycerol kinase n=3 Tax=Clostridium RepID=N9XMV0_9CLOT
Glycerol kinase {ECO:0000313|EMBL:ENZ46855.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_813_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12410..13348)
DNA (939bp) protein (313aa)
transketolase subunit B (EC:2.2.1.1)
Transketolase n=3 Tax=Clostridium RepID=N9Z7Q8_9CLOT
Transketolase {ECO:0000313|EMBL:ENZ46854.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_813_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13341..14174)
DNA (834bp) protein (278aa)
transketolase subunit A (EC:2.2.1.1)
Transketolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWW1_9CLOT
Transketolase {ECO:0000313|EMBL:ENZ16528.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_813_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14189..15145)
DNA (957bp) protein (319aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RQT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98755.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
inner-membrane translocator
L3_133_000M1_scaffold_813_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15151..16668)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RQT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16905.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ABC transporter
L3_133_000M1_scaffold_813_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16727..17791)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9XMU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ16525.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Periplasmic binding protein domain containing protein
L3_133_000M1_scaffold_813_16
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18123..19139)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RQT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98758.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
LacI family transcriptional regulator
L3_133_000M1_scaffold_813_17
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19256..19774)
DNA (519bp) protein (173aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
anaerobic ribonucleoside-triphosphate reductase activating protein (EC:1.97.1.4)
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=6 Tax=Clostridium RepID=A8RQT6_9CLOT
L3_133_000M1_scaffold_813_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19776..21239)
DNA (1464bp) protein (488aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RQT7_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:ENZ16522.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_813_19
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21293..21862)
DNA (570bp) protein (190aa)
anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F139_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98760.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_133_000M1_scaffold_813_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22148..23185)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=A8RQU0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP16912.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
transcriptional regulator, LacI family
L3_133_000M1_scaffold_813_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23546..25795
DNA (2250bp) protein (750aa)
PTS system, IIBC component n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XMT8_9CLOT
PTS system, IIBC component {ECO:0000313|EMBL:ENZ16520.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
PTS system maltose-specific IIA component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIB component, Glc family (TC 4.A.1.1.11)/PTS system maltose-specific IIC component, Glc family (TC 4.A.1.1.11)
L3_133_000M1_scaffold_813_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25862..26734
DNA (873bp) protein (291aa)
Exodeoxyribonuclease III n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z7P2_9CLOT
Exodeoxyribonuclease III {ECO:0000313|EMBL:ENZ16519.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Metal-dependent hydrolase
L3_133_000M1_scaffold_813_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26769..28268
DNA (1500bp) protein (500aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YWU8_9CLOT
L3_133_000M1_scaffold_813_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28358..29140)
DNA (783bp) protein (261aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RQU6_9CLOT
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:ENZ46842.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
cell wall hydrolase/autolysin
L3_133_000M1_scaffold_813_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29216..29656)
DNA (441bp) protein (147aa)
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XME7_9CLOT
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein {ECO:0000313|EMBL:ENZ16516.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
transcriptional regulator, AsnC family
L3_133_000M1_scaffold_813_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29690..30910)
DNA (1221bp) protein (407aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9XMT2_9CLOT
LL-diaminopimelate aminotransferase
L3_133_000M1_scaffold_813_27
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31126..31956)
DNA (831bp) protein (277aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=6 Tax=Clostridium RepID=A8RQV0_9CLOT
L3_133_000M1_scaffold_813_28
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32018..32566)
DNA (549bp) protein (183aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RQV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX98768.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ANTAR domain-containing protein
L3_133_000M1_scaffold_813_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32612..33949)
DNA (1338bp) protein (446aa)
Glutamine synthetase, type I n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z8V6_9CLOT
Glutamine synthetase, type I {ECO:0000313|EMBL:ENZ16512.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
glutamine synthetase, type I
L3_133_000M1_scaffold_813_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34160..34663)
DNA (504bp) protein (168aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Diaminopimelate epimerase n=8 Tax=Clostridium RepID=N9XME1_9CLOT
diaminopimelate epimerase
Displaying items 1-30 of 83 in total

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