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L3_133_000M1_scaffold_834

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_834_1
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(404..850)
DNA (447bp) protein (149aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N176_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY97780.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_834_2
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(930..1685)
DNA (756bp) protein (252aa)
Uncharacterized conserved protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NKA8_9FIRM
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY97781.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_834_3
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2201..2626)
DNA (426bp) protein (142aa)
Flavodoxin short chain n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NL10_9FIRM
Flavodoxin short chain {ECO:0000313|EMBL:CCY97782.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
flavodoxin, short chain
L3_133_000M1_scaffold_834_4
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2656..3249)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N1X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY97783.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_834_5
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3607..4011
DNA (405bp) protein (135aa)
Fe2+/Zn2+ uptake regulation proteins n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N7B1_9FIRM
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:CCY97784.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Fe2+/Zn2+ uptake regulation proteins
L3_133_000M1_scaffold_834_6
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4118..4663
DNA (546bp) protein (182aa)
Rubrerythrin n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N182_9FIRM
Rubrerythrin {ECO:0000313|EMBL:CCY97785.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Rubrerythrin
L3_133_000M1_scaffold_834_7
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5119..6384
DNA (1266bp) protein (422aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R9KCV5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENZ13559.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
transposase
L3_133_000M1_scaffold_834_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6444..7142)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2DFN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI95153.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_834_9
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7217..7783)
DNA (567bp) protein (189aa)
HD domain protein n=1 Tax=Blautia sp. KLE 1732 RepID=U2CX90_9FIRM
HD domain protein {ECO:0000313|EMBL:ERI95154.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
Predicted hydrolases of HD superfamily
L3_133_000M1_scaffold_834_10
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8054..8548
DNA (495bp) protein (165aa)
Predicted HD superfamily hydrolase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NN72_9FIRM
Predicted HD superfamily hydrolase {ECO:0000313|EMBL:CCY98816.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
Predicted HD superfamily hydrolase
L3_133_000M1_scaffold_834_11
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8718..13508)
DNA (4791bp) protein (1597aa)
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LH83_9FIRM
Bacterial Ig-like domain (group 2)./Bacterial Ig-like domain (group 3).
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CBL19194.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_834_12
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13966..14835)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NAA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98814.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cbiQ4; cobalt ABC transport system permease protein CbiQ4
L3_133_000M1_scaffold_834_13
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14825..15562)
DNA (738bp) protein (246aa)
Putative membrane protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4W2_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCY98813.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_834_14
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15544..17253)
DNA (1710bp) protein (570aa)
Cobalt ABC transport system ATP-binding protein CbiO5 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NPD7_9FIRM
Cobalt ABC transport system ATP-binding protein CbiO5 {ECO:0000313|EMBL:CCY98812.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
ATPase component of various ABC-type transport systems
L3_133_000M1_scaffold_834_15
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17226..18119)
DNA (894bp) protein (298aa)
Cobalt transport protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NN67_9FIRM
Cobalt transport protein {ECO:0000313|EMBL:CCY98811.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
cobalt transporter
L3_133_000M1_scaffold_834_16
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18116..21862)
DNA (3747bp) protein (1249aa)
S-layer domain protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N473_9FIRM
S-layer domain protein {ECO:0000313|EMBL:CCY98810.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
S-layer protein
L3_133_000M1_scaffold_834_17
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21855..23321)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N411_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98735.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
hypothetical protein
L3_133_000M1_scaffold_834_18
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23966..24796
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NN00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY98736.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
BspA-like cell surface protein
L3_133_000M1_scaffold_834_19
Eubacterium sp. CAG:146, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24942..28619)
DNA (3678bp) protein (1226aa)
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) n=1 Tax=Eubacterium sp. CAG:146 RepID=R5GLJ3_9FIRM
Bacterial Ig-like domain (Group 2)./Bacterial Ig-like domain (Group 3) {ECO:0000313|EMBL:CCY13662.1}; TaxID=1262879 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:146.;"
GLUG domain-containing protein
L3_133_000M1_scaffold_834_20
Methanosarcina acetivorans, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28846..30705)
DNA (1860bp) protein (620aa)
Cell surface protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI67_METAC
cell surface protein
Cell surface protein {ECO:0000313|EMBL:AAM07633.1}; TaxID=188937 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /; C2A).;"
L3_133_000M1_scaffold_834_21
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31124..33586)
DNA (2463bp) protein (821aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=2 Tax=Clostridiales RepID=R7H1P8_9FIRM
L3_133_000M1_scaffold_834_22
Ruminococcus sp. CAG:90, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33586..36750)
DNA (3165bp) protein (1055aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262968 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:90.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7H0S0_9FIRM
L3_133_000M1_scaffold_834_23
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37436..38758
DNA (1323bp) protein (441aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N5N4_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CCY99058.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_834_24
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38732..39691)
DNA (960bp) protein (320aa)
DNA polymerase III epsilon subunit and related 3'-5' exonucleases n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N4Z7_9FIRM
DNA polymerase III epsilon subunit and related 3'-5' exonucleases {ECO:0000313|EMBL:CCY99060.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
DNA polymerase III, epsilon subunit and related 3'-5' exonucleases
L3_133_000M1_scaffold_834_25
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(39782..40744)
DNA (963bp) protein (321aa)
Inosine-uridine nucleoside N-ribohydrolase (EC:3.2.2.8 3.2.2.1)
Inosine-uridine nucleoside N-ribohydrolase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5NQ56_9FIRM
Inosine-uridine nucleoside N-ribohydrolase {ECO:0000313|EMBL:CCY99062.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
L3_133_000M1_scaffold_834_26
Ruminococcus sp. CAG:17, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41178..41615)
DNA (438bp) protein (146aa)
Heat shock protein Hsp20 n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N500_9FIRM
Heat shock protein Hsp20 {ECO:0000313|EMBL:CCY99065.1}; TaxID=1262951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:17.;"
heat shock protein Hsp20
Displaying 26 items

View Taxonomy