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L3_133_000M1_scaffold_919

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Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_919_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..600
DNA (498bp) protein (166aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Endoribonuclease YbeY n=7 Tax=Clostridium RepID=A8RUL8_9CLOT
conserved hypothetical protein TIGR00043
L3_133_000M1_scaffold_919_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

597..1745
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YRY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10547.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_919_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1751..3448
DNA (1698bp) protein (566aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8RUL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP15885.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
virulence factor MVIN family protein
L3_133_000M1_scaffold_919_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3611..4009
DNA (399bp) protein (133aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ33027.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_133_000M1_scaffold_919_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4343..5668
DNA (1326bp) protein (442aa)
Flavoprotein n=2 Tax=Clostridium bolteae RepID=N9ZQT6_9CLOT
Flavoprotein {ECO:0000313|EMBL:ENZ52267.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Predicted flavoproteins
L3_133_000M1_scaffold_919_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5665..7353
DNA (1689bp) protein (563aa)
FAD-dependent oxidoreductase n=3 Tax=Clostridium RepID=N9YRZ0_9CLOT
FAD-dependent oxidoreductase {ECO:0000313|EMBL:ENZ10552.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Uncharacterized FAD-dependent dehydrogenases
L3_133_000M1_scaffold_919_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7442..8305
DNA (864bp) protein (288aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Glutamate 5-kinase n=4 Tax=Clostridium bolteae RepID=A8RUL1_9CLOT
glutamate 5-kinase
L3_133_000M1_scaffold_919_8
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8350..8571
DNA (222bp) protein (74aa)
UPF0291 protein HMPREF1082_04133 n=4 Tax=Clostridium RepID=N9YQM4_9CLOT
UPF0291 protein BN723_02278 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_133_000M1_scaffold_919_9
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8571..9836
DNA (1266bp) protein (422aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=2 Tax=Clostridium RepID=N9X5V1_9CLOT
L3_133_000M1_scaffold_919_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9917..10498
DNA (582bp) protein (194aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUK8_9CLOT
signal peptidase I
L3_133_000M1_scaffold_919_11
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10523..11293
DNA (771bp) protein (257aa)
UPF0246 protein HMPREF1082_04136 n=4 Tax=Clostridium RepID=N9YRZ6_9CLOT
UPF0246 protein BN723_02281 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
hypothetical protein
L3_133_000M1_scaffold_919_12
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11348..12943)
DNA (1596bp) protein (532aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=2 Tax=Clostridium bolteae RepID=R0B0K5_9CLOT
L3_133_000M1_scaffold_919_13
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13070..13723
DNA (654bp) protein (218aa)
CarD family transcriptional regulator n=4 Tax=Clostridium RepID=N9YQN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97360.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
CarD family transcriptional regulator
L3_133_000M1_scaffold_919_14
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13815..14084
DNA (270bp) protein (90aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=N9X5V7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52276.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_919_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14081..15412
DNA (1332bp) protein (444aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium bolteae CAG:59 RepID=R5F9B9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97362.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_133_000M1_scaffold_919_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15379..16290)
DNA (912bp) protein (304aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8RUK1_9CLOT
AraC family transcriptional regulator {ECO:0000313|EMBL:ENZ10562.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
AraC family transcriptional regulator
L3_133_000M1_scaffold_919_17
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16517..16891
DNA (375bp) protein (125aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=R0B0K3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97364.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
transcriptional regulator
L3_133_000M1_scaffold_919_18
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17097..17297
DNA (201bp) protein (67aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUJ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97365.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
XRE family transcriptional regulator
L3_133_000M1_scaffold_919_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17341..17796
DNA (456bp) protein (152aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9ZR13_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52281.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_919_20
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17927..19672
DNA (1746bp) protein (582aa)
C4-dicarboxylate anaerobic carrier n=2 Tax=Clostridium bolteae RepID=N9ZQS5_9CLOT
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:ENZ52282.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
C4-dicarboxylate anaerobic carrier
L3_133_000M1_scaffold_919_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19907..21415
DNA (1509bp) protein (503aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=5 Tax=Clostridium RepID=A8RUJ4_9CLOT
tRNA-i(6)A37 thiotransferase enzyme MiaB
L3_133_000M1_scaffold_919_22
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21492..24164
DNA (2673bp) protein (891aa)
DNA mismatch repair protein MutS n=2 Tax=Clostridium bolteae RepID=R0B0J9_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
DNA mismatch repair protein MutS
L3_133_000M1_scaffold_919_23
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24161..25078
DNA (918bp) protein (306aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Clostridium bolteae CAG:59 RepID=R5EXB4_9CLOT
tRNA (guanine-N1)-methyltransferase
L3_133_000M1_scaffold_919_24
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25980..27257
DNA (1278bp) protein (426aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9X5W9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ52286.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_919_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27444..27671
DNA (228bp) protein (76aa)
50S ribosomal protein L19 n=7 Tax=Clostridium RepID=A8RUI9_9CLOT
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
50S ribosomal protein L19
L3_133_000M1_scaffold_919_26
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27782..28333
DNA (552bp) protein (184aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
Signal peptidase I n=3 Tax=Clostridium RepID=N9YS12_9CLOT
signal peptidase I
L3_133_000M1_scaffold_919_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28351..29217
DNA (867bp) protein (289aa)
Ribosome biogenesis GTPase A n=4 Tax=Clostridium RepID=N9YFB8_9CLOT
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ribosome biogenesis GTP-binding protein YlqF
L3_133_000M1_scaffold_919_28
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29220..29882
DNA (663bp) protein (221aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YQQ2_9CLOT
L3_133_000M1_scaffold_919_29
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29875..30216
DNA (342bp) protein (114aa)
UPF0102 protein CLOBOL_04028 n=7 Tax=Clostridium RepID=A8RUI4_9CLOT
UPF0102 protein BN723_02076 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
conserved hypothetical protein TIGR00252
L3_133_000M1_scaffold_919_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30238..31092
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X5G0_9CLOT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
conserved hypothetical protein TIGR00726
Displaying items 1-30 of 76 in total

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