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L3_133_000M1_scaffold_930

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_930_1
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..998
DNA (996bp) protein (332aa)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
isoaspartyl dipeptidase. Metallo peptidase. MEROPS family M38 (EC:3.4.19.5)
Isoaspartyl dipeptidase n=1 Tax=Clostridium sp. CAG:81 RepID=R5GE23_9CLOT
L3_133_000M1_scaffold_930_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1325..2869
DNA (1545bp) protein (515aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit/GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1S7_9CLOT
L3_133_000M1_scaffold_930_3
Heliobacterium modesticaldum, Heliobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2958..4073)
DNA (1116bp) protein (372aa)
Phage integrase family protein n=1 Tax=Clostridium thermocellum BC1 RepID=U4MWF6_CLOTM
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:ABZ82681.1}; TaxID=498761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Heliobacteriaceae; Heliobacterium.;" source="Heliobacterium modesticaldum (strain ATCC 51547 / Ice1).;"
L3_133_000M1_scaffold_930_4
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4060..4272)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI66_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19527.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_5
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4436..5119)
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI67_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19528.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_6
unknown

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5209..5304
DNA (96bp) protein (32aa)

This feature has no annotations

L3_133_000M1_scaffold_930_7
unknown

Not on your lists

comp(5415..5672)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_133_000M1_scaffold_930_8
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5943..6155
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI68_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19529.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_9
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6199..6699
DNA (501bp) protein (167aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI69_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19530.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_10
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6718..6912
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI70_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19531.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_11
unknown

Not on your lists

6912..7172
DNA (261bp) protein (87aa)

This feature has no annotations

L3_133_000M1_scaffold_930_12
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7150..7428
DNA (279bp) protein (93aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI71_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19532.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_13
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7440..7772
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI72_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19533.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_14
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7747..7983
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI73_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19534.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_15
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8044..8493
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI74_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19535.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_16
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8490..10445
DNA (1956bp) protein (652aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI75_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19536.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_17
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10448..10741
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI76_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19537.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_18
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10741..10932
DNA (192bp) protein (64aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI77_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19538.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_19
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10936..12048
DNA (1113bp) protein (371aa)
RecT family n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI78_9FIRM
RecT family.
RecT family {ECO:0000313|EMBL:CBL19539.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_20
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12048..12749
DNA (702bp) protein (234aa)
Metal-dependent hydrolases of the beta-lactamase superfamily I n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI79_9FIRM
Metal-dependent hydrolases of the beta-lactamase superfamily I
Metal-dependent hydrolases of the beta-lactamase superfamily I {ECO:0000313|EMBL:CBL19540.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_21
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12764..13747
DNA (984bp) protein (328aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI80_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19541.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_22
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13698..14672
DNA (975bp) protein (325aa)
DNA replication protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI81_9FIRM
DNA replication protein
DNA replication protein {ECO:0000313|EMBL:CBL19542.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_23
unknown

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14672..15022
DNA (351bp) protein (117aa)

This feature has no annotations

L3_133_000M1_scaffold_930_24
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15035..15781
DNA (747bp) protein (249aa)
DNA modification methylase (EC:2.1.1.72)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
DNA modification methylase n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI84_9FIRM
L3_133_000M1_scaffold_930_25
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15762..15971
DNA (210bp) protein (70aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI85_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19546.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_26
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15977..16240
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL19547.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_133_000M1_scaffold_930_27
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16227..16664
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5UAC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ65917.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
L3_133_000M1_scaffold_930_28
unknown

Not on your lists

16654..16872
DNA (219bp) protein (73aa)

This feature has no annotations

L3_133_000M1_scaffold_930_29
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16865..17290
DNA (426bp) protein (142aa)
Ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI {ECO:0000313|EMBL:CBL19548.1}; EC=3.1.26.4 {ECO:0000313|EMBL:CBL19548.1};; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
Ribonuclease HI n=1 Tax=Ruminococcus sp. SR1/5 RepID=D4LI87_9FIRM
L3_133_000M1_scaffold_930_30
unknown

Not on your lists

17290..17487
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 1-30 of 52 in total

View Taxonomy