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L3_133_000M1_scaffold_2406

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_2406_1
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(138..1595)
DNA (1458bp) protein (486aa)
aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=2 Tax=Bacteroides caccae RepID=I8VDM1_9BACE
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EIY23432.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_133_000M1_scaffold_2406_2
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1618..2604)
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9Q2U7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM21001.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_133_000M1_scaffold_2406_3
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


2837..3373
DNA (537bp) protein (179aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=3 Tax=Bacteroides RepID=A5ZFP0_9BACE
L3_133_000M1_scaffold_2406_4
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3406..4746
DNA (1341bp) protein (447aa)
Magnesium transporter n=3 Tax=Bacteroides RepID=A5ZFN9_9BACE
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Mg2+ transporter (mgtE)
L3_133_000M1_scaffold_2406_5
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4832..6685
DNA (1854bp) protein (618aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZFN8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20998.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Domain of Unknown Function (DUF349).
L3_133_000M1_scaffold_2406_6
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7245..7604
DNA (360bp) protein (120aa)
Ribosomal silencing factor RsfS n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDL6_9BACE
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
iojap-related protein
L3_133_000M1_scaffold_2406_7
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7671..9617
DNA (1947bp) protein (649aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
ATP-dependent zinc metalloprotease FtsH n=4 Tax=root RepID=A5ZFN5_9BACE
metalloprotease FtsH
L3_133_000M1_scaffold_2406_8
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9630..10478
DNA (849bp) protein (283aa)
Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938}; EC=2.7.7.41 {ECO:0000256|RuleBase:RU003938};; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
Phosphatidate cytidylyltransferase n=3 Tax=Bacteroides RepID=I8VAH7_9BACE
phosphatidate cytidylyltransferase
L3_133_000M1_scaffold_2406_9
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10581..11369)
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZFN3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20993.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_133_000M1_scaffold_2406_10
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11461..12597)
DNA (1137bp) protein (379aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=2 Tax=Bacteroides caccae RepID=A5ZFN2_9BACE
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EIY23423.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_133_000M1_scaffold_2406_11
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12613..13380)
DNA (768bp) protein (256aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
5'-nucleotidase/3'-nucleotidase/exopolyphosphatase (EC:3.1.3.5 3.1.3.6 3.6.1.11)
5'-nucleotidase SurE n=2 Tax=Bacteroides caccae RepID=A5ZFN1_9BACE
L3_133_000M1_scaffold_2406_12
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13552..14394
DNA (843bp) protein (281aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=2 Tax=Bacteroides caccae RepID=A5ZFN0_9BACE
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:EDM20990.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
chromosome segregation ATPase
L3_133_000M1_scaffold_2406_13
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14409..15299
DNA (891bp) protein (297aa)
ParB-like protein n=2 Tax=Bacteroides caccae RepID=A5ZFM9_9BACE
ParB-like protein {ECO:0000313|EMBL:EDM20989.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
chromosome segregation DNA-binding protein
L3_133_000M1_scaffold_2406_14
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15300..16187
DNA (888bp) protein (296aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=A5ZFM8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20988.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_133_000M1_scaffold_2406_15
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16221..17516
DNA (1296bp) protein (432aa)
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) (EC:3.2.1.-)
Transglycosylase SLT domain protein n=4 Tax=root RepID=A5ZFM7_9BACE
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EDM20987.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
L3_133_000M1_scaffold_2406_16
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17589..19835
DNA (2247bp) protein (749aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Bacteroides RepID=A5ZFM6_9BACE
RelA/SpoT family protein {ECO:0000313|EMBL:CCZ73177.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_133_000M1_scaffold_2406_17
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19875..20219)
DNA (345bp) protein (115aa)
Transcriptional regulator, MerR family n=3 Tax=Bacteroides RepID=A5ZFM5_9BACE
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EDM20985.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
transcriptional regulator
L3_133_000M1_scaffold_2406_18
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20244..21212)
DNA (969bp) protein (323aa)
Peptidase, M23 family n=3 Tax=Bacteroides RepID=A5ZFM4_9BACE
Peptidase, M23 family {ECO:0000313|EMBL:EDM20984.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
Membrane proteins related to metalloendopeptidases
L3_133_000M1_scaffold_2406_19
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21370..23880
DNA (2511bp) protein (837aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESS9_9BACE
L3_133_000M1_scaffold_2406_20
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24196..26433
DNA (2238bp) protein (746aa)
Uncharacterized protein n=2 Tax=Bacteroides caccae RepID=I9Q3D1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23413.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-1,2-mannosidase, putative
L3_133_000M1_scaffold_2406_21
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26462..27016
DNA (555bp) protein (185aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFM1_9BACE
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDM20981.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_133_000M1_scaffold_2406_22
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27092..30310
DNA (3219bp) protein (1073aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I8VAG1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73170.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
alpha-1,2-mannosidase, putative
L3_133_000M1_scaffold_2406_23
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30346..32616
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I9ESS5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23409.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
alpha-1,2-mannosidase, putative
L3_133_000M1_scaffold_2406_24
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32790..33224
DNA (435bp) protein (145aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=R5U516_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20976.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
L3_133_000M1_scaffold_2406_25
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33175..33390)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Bacteroides caccae CL03T12C61 RepID=I8VDJ5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23407.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
L3_133_000M1_scaffold_2406_26
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33530..36916
DNA (3387bp) protein (1129aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides caccae ATCC 43185 RepID=A5ZFL5_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDM20975.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
putative TonB-dependent outer membrane receptor exported protein
L3_133_000M1_scaffold_2406_27
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36937..38661
DNA (1725bp) protein (575aa)
Conserved domain protein n=2 Tax=Bacteroides caccae RepID=A5ZFL4_9BACE
Conserved domain protein {ECO:0000313|EMBL:EDM20974.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
conserved hypothetical lipoprotein
L3_133_000M1_scaffold_2406_28
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38801..40219)
DNA (1419bp) protein (473aa)
PIF1 helicase. (EC:3.1.11.5)
Uncharacterized protein n=2 Tax=Bacteroides RepID=I9Q3C2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ73164.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
L3_133_000M1_scaffold_2406_29
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40315..41001
DNA (687bp) protein (229aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A5ZFL2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY23402.1}; TaxID=997873 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae CL03T12C61.;"
hypothetical protein
L3_133_000M1_scaffold_2406_30
Bacteroides caccae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41117..41677
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=root RepID=A5ZFL1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EDM20971.1}; TaxID=411901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides caccae ATCC 43185.;"
hypothetical protein
Displaying items 1-30 of 40 in total

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