ggKbase home page

L3_133_000M1_scaffold_2728

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_2728_1

Not on your lists

comp(1..1527)
DNA (1527bp) protein (509aa)
TraG family protein n=1 Tax=gut metagenome RepID=J9GQ77_9ZZZZ
TraG family protein {ECO:0000313|EMBL:EJX09949.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
mobilization protein
L3_133_000M1_scaffold_2728_2
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1580..2842)
DNA (1263bp) protein (421aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYT6_9BACE
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:EGF49259.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
mobilization protein
L3_133_000M1_scaffold_2728_3
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2827..3249)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49260.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_4
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4017..4769
DNA (753bp) protein (251aa)
Conjugative transposon protein TraA family protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYU0_9BACE
Conjugative transposon protein TraA family protein {ECO:0000313|EMBL:EGF49263.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugate transposon protein
L3_133_000M1_scaffold_2728_5
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4775..5209
DNA (435bp) protein (145aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYU1_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF49264.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_6
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5211..5870
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYU2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49265.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_7
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5964..6287
DNA (324bp) protein (108aa)
Conjugative transposon protein TraE n=2 Tax=root RepID=F3PYU3_9BACE
Conjugative transposon protein TraE {ECO:0000313|EMBL:EGF49266.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugate transposon protein
L3_133_000M1_scaffold_2728_8
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6291..6617
DNA (327bp) protein (109aa)
Conjugative transposon protein TraF n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYU4_9BACE
Conjugative transposon protein TraF {ECO:0000313|EMBL:EGF49267.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugate transposon protein
L3_133_000M1_scaffold_2728_9

Not on your lists

6614..9148
DNA (2535bp) protein (845aa)
Conjugative transposon protein TraG n=1 Tax=gut metagenome RepID=J9FHA9_9ZZZZ
Conjugative transposon protein TraG {ECO:0000313|EMBL:EJW94306.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugal transfer protein TraG
L3_133_000M1_scaffold_2728_10
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9141..9737
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYU8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49271.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_11
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9779..10132
DNA (354bp) protein (118aa)
Uncharacterized protein n=2 Tax=root RepID=F3PYU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49272.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugal transfer protein
L3_133_000M1_scaffold_2728_12

Not on your lists

10129..10758
DNA (630bp) protein (210aa)
Conjugative transposon protein TraI n=1 Tax=gut metagenome RepID=J9FIP0_9ZZZZ
Conjugative transposon protein TraI {ECO:0000313|EMBL:EJW94303.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugate transposon protein
L3_133_000M1_scaffold_2728_13
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10762..11775
DNA (1014bp) protein (338aa)
Conjugative transposon TraJ protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV1_9BACE
Conjugative transposon TraJ protein {ECO:0000313|EMBL:EGF49274.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugative transposon TraJ protein
L3_133_000M1_scaffold_2728_14
Bacteroides dorei CAG:222, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11809..12027)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CAG:222 RepID=R6HJA9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB37953.1}; TaxID=1263042 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides dorei CAG:222.;"
L3_133_000M1_scaffold_2728_15

Not on your lists

12041..12334
DNA (294bp) protein (98aa)
Conjugative transposon TraK protein n=2 Tax=root RepID=F3PYV2_9BACE
Conjugative transposon TraK protein {ECO:0000313|EMBL:EJW94301.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugative transposon TraK protein
L3_133_000M1_scaffold_2728_16
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12560..13879
DNA (1320bp) protein (440aa)
Conjugative transposon TraM protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV3_9BACE
Conjugative transposon TraM protein {ECO:0000313|EMBL:EGF49276.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugal transfer protein
L3_133_000M1_scaffold_2728_17
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13886..14833
DNA (948bp) protein (316aa)
Conjugative transposon TraN protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV4_9BACE
Conjugative transposon TraN protein {ECO:0000313|EMBL:EGF49277.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugal transfer protein
L3_133_000M1_scaffold_2728_18
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14830..15387
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49278.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugal transfer protein TraO
L3_133_000M1_scaffold_2728_19
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15394..16254
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49279.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_20
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16251..16457
DNA (207bp) protein (69aa)
Conjugative transposon protein TraQ n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYV7_9BACE
Conjugative transposon protein TraQ {ECO:0000313|EMBL:EGF49280.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
conjugal transfer protein TraQ
L3_133_000M1_scaffold_2728_21

Not on your lists

16454..16684
DNA (231bp) protein (77aa)
Conjugative transposon protein TraQ n=1 Tax=gut metagenome RepID=J9FXL7_9ZZZZ
Conjugative transposon protein TraQ {ECO:0000313|EMBL:EJW94297.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
conjugal transfer protein TraQ
L3_133_000M1_scaffold_2728_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16681..17187
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W158_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86492.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
lysozyme
L3_133_000M1_scaffold_2728_23

Not on your lists

comp(17233..17772)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9FH99_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW94296.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_2728_24

Not on your lists

comp(17840..18577)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=gut metagenome RepID=J9C390_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EJW94295.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_2728_25

Not on your lists

comp(18574..19827)
DNA (1254bp) protein (418aa)
ATP binding protein n=1 Tax=gut metagenome RepID=J9G415_9ZZZZ
ATP binding protein {ECO:0000313|EMBL:EJW94294.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
ATP binding protein
L3_133_000M1_scaffold_2728_26

Not on your lists

comp(19880..20083)
DNA (204bp) protein (68aa)
DNA-binding helix-turn-helix protein n=2 Tax=root RepID=F3PYW3_9BACE
Toxin-antitoxin system, antitoxin component, Xre family {ECO:0000313|EMBL:EJW94293.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_2728_27

Not on your lists

comp(20184..21020)
DNA (837bp) protein (279aa)
Uncharacterized protein n=2 Tax=root RepID=F3PYW4_9BACE
Type I restriction enzyme, M subunit {ECO:0000313|EMBL:EJW94292.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
restriction endonuclease subunit M
L3_133_000M1_scaffold_2728_28
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20977..21309)
DNA (333bp) protein (111aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYW5_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF49288.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
L3_133_000M1_scaffold_2728_29

Not on your lists

comp(21366..21656)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=root RepID=F3PYW6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EJW94290.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_2728_30
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21695..22459)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PYW7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGF49290.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
hypothetical protein
Displaying items 1-30 of 36 in total

View Taxonomy