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L3_133_000M1_scaffold_1084

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Displaying items 1-30 of 159 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1084_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(73..1992)
DNA (1920bp) protein (640aa)
Chaperone protein DnaK n=6 Tax=Bacteroides RepID=A7VAF1_BACUN
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
molecular chaperone DnaK
L3_133_000M1_scaffold_1084_2
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2432..3838
DNA (1407bp) protein (469aa)
MATE efflux family protein n=2 Tax=Bacteroides RepID=A7VAF4_BACUN
MATE efflux family protein {ECO:0000313|EMBL:EDO52031.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
multi antimicrobial extrusion protein MatE
L3_133_000M1_scaffold_1084_3
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3901..4467
DNA (567bp) protein (189aa)
Cyclic nucleotide-binding domain protein n=2 Tax=Bacteroides RepID=A7VAF5_BACUN
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EDO52032.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Crp/Fnr family transcriptional regulator
L3_133_000M1_scaffold_1084_4
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4549..5340)
DNA (792bp) protein (264aa)
META domain protein n=3 Tax=Bacteroides RepID=A7VAF6_BACUN
META domain protein {ECO:0000313|EMBL:EDO52033.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_133_000M1_scaffold_1084_5
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5536..6729
DNA (1194bp) protein (398aa)
Saccharopine dehydrogenase n=6 Tax=Bacteroides RepID=A7VAF8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82943.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
carboxynorspermidine dehydrogenase
L3_133_000M1_scaffold_1084_6
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6782..7228
DNA (447bp) protein (149aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EDO52036.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EDO52036.1};; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
Peroxiredoxin (EC:1.11.1.15)
Antioxidant, AhpC/TSA family n=6 Tax=Bacteroides RepID=A7VAF9_BACUN
L3_133_000M1_scaffold_1084_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7247..8284
DNA (1038bp) protein (346aa)
Protein RecA n=8 Tax=Bacteroides RepID=A7VAG0_BACUN
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
RecA protein
L3_133_000M1_scaffold_1084_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8352..9062)
DNA (711bp) protein (237aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=D2F048_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS50612.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_133_000M1_scaffold_1084_9
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9069..9593)
DNA (525bp) protein (175aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2F047_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82939.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_133_000M1_scaffold_1084_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9574..9858)
DNA (285bp) protein (95aa)
Sigma-70 region 2 n=1 Tax=Bacteroides sp. D20 RepID=D2F046_9BACE
Sigma-70 region 2 {ECO:0000313|EMBL:EFA19514.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
RNA polymerase, sigma-24 subunit, ECF subfamily
L3_133_000M1_scaffold_1084_11
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9855..10028)
DNA (174bp) protein (58aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EH19_9BACE
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EFV24826.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
putative RNA polymerase ECF-type sigma factor
L3_133_000M1_scaffold_1084_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10158..10457)
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D2F045_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY82937.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
hypothetical protein
L3_133_000M1_scaffold_1084_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10663..11250
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 4_1_36 RepID=E5VE80_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFV24824.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
hypothetical protein
L3_133_000M1_scaffold_1084_14
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11253..11564
DNA (312bp) protein (104aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A5C0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82935.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
NGN domain-containing protein
L3_133_000M1_scaffold_1084_15
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11552..12574)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2F042_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA19510.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1084_16
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12688..13575)
DNA (888bp) protein (296aa)
LysR substrate binding domain protein n=2 Tax=Bacteroides RepID=D2F041_9BACE
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KDS50620.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
Transcriptional regulator
L3_133_000M1_scaffold_1084_17
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13590..14186)
DNA (597bp) protein (199aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=A7VAH0_BACUN
Putative l-selectin {ECO:0000313|EMBL:KDS50621.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_133_000M1_scaffold_1084_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14730..17324
DNA (2595bp) protein (865aa)
Chaperone ClpB n=2 Tax=Bacteroides uniformis RepID=I9A1A6_BACUN
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
ATP-dependent chaperone ClpB
L3_133_000M1_scaffold_1084_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17410..17841)
DNA (432bp) protein (144aa)
Uncharacterized protein n=2 Tax=Bacteroides uniformis RepID=I9A5B6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:KDS50623.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
hypothetical protein
L3_133_000M1_scaffold_1084_20
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17958..18557)
DNA (600bp) protein (200aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Bacteroides sp. D20 RepID=D2F037_9BACE
L3_133_000M1_scaffold_1084_21
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18547..19563)
DNA (1017bp) protein (339aa)
YbbR-like protein n=5 Tax=Bacteroides RepID=A7VAH4_BACUN
YbbR-like protein {ECO:0000313|EMBL:EDO52051.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_133_000M1_scaffold_1084_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19579..19914)
DNA (336bp) protein (112aa)
Preprotein translocase, YajC subunit n=5 Tax=Bacteroides RepID=A7VAH5_BACUN
Preprotein translocase subunit {ECO:0000313|EMBL:EFV24816.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
protein translocase subunit yajC
L3_133_000M1_scaffold_1084_23
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19953..20879)
DNA (927bp) protein (309aa)
Transcription antitermination factor NusB n=5 Tax=Bacteroides RepID=A7VAH6_BACUN
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
NusB antitermination factor
L3_133_000M1_scaffold_1084_24
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20964..21065
DNA (102bp) protein (34aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=I9A5B2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:CDE01568.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
L3_133_000M1_scaffold_1084_25
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21132..21506
DNA (375bp) protein (125aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=A7VAH7_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA19501.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
PUR-alpha/beta/gamma DNA/RNA-binding protein
L3_133_000M1_scaffold_1084_26
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


21645..22235
DNA (591bp) protein (197aa)
50S ribosomal protein L25 n=4 Tax=Bacteroides RepID=A7VAH8_BACUN
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
50S ribosomal protein L25
L3_133_000M1_scaffold_1084_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22497..23060
DNA (564bp) protein (188aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EFT0_9BACE
L3_133_000M1_scaffold_1084_28
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23057..23416
DNA (360bp) protein (120aa)
S4 domain protein n=4 Tax=Bacteroides RepID=A7VAI0_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY82921.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
heat shock protein Hsp15
L3_133_000M1_scaffold_1084_29
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23413..24399
DNA (987bp) protein (329aa)
Oxidoreductase, NAD-binding domain protein n=1 Tax=Bacteroides sp. D20 RepID=D2F029_9BACE
Oxidoreductase, NAD-binding domain protein {ECO:0000313|EMBL:EFA19497.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
oxidoreductase domain protein
L3_133_000M1_scaffold_1084_30
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24421..26691)
DNA (2271bp) protein (757aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis CAG:3 RepID=R7EJ87_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDE01562.1}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
transporter, CPA2 family
Displaying items 1-30 of 159 in total

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