ggKbase home page

L3_133_000M1_scaffold_1191

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1191_1
unknown

Not on your lists

234..380
DNA (147bp) protein (49aa)

This feature has no annotations

L3_133_000M1_scaffold_1191_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(424..2184)
DNA (1761bp) protein (587aa)
Fibronectin-binding protein A domain protein n=2 Tax=root RepID=R5ATM2_9FIRM
Fibronectin-binding protein A domain protein {ECO:0000313|EMBL:CCX45309.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
fibronectin-binding protein
L3_133_000M1_scaffold_1191_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(2186..2653)
DNA (468bp) protein (156aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Mini-ribonuclease 3 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQP8_9FIRM
hypothetical protein
L3_133_000M1_scaffold_1191_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(2643..5240)
DNA (2598bp) protein (866aa)
FtsK/SpoIIIE family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX40_9FIRM
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:CCX45307.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ftsK; cell division protein FtsK
L3_133_000M1_scaffold_1191_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5257..6093)
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
uppP; undecaprenyl-diphosphatase (EC:3.6.1.27)
Undecaprenyl-diphosphatase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1H1_9FIRM
L3_133_000M1_scaffold_1191_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(6199..7608)
DNA (1410bp) protein (470aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5APK0_9FIRM
Aspartyl aminopeptidase
L3_133_000M1_scaffold_1191_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(7605..8807)
DNA (1203bp) protein (401aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Sua5/YciO/YrdC/YwlC family protein n=2 Tax=root RepID=R5ATL8_9FIRM
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:CCX45304.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_133_000M1_scaffold_1191_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(8804..9871)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQP3_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
prfA; peptide chain release factor 1
L3_133_000M1_scaffold_1191_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(9987..11867)
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX36_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45302.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
secreted protein
L3_133_000M1_scaffold_1191_10
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11995..12705)
DNA (711bp) protein (237aa)
High affinity branched-chain amino acid ABC transporter ATP-binding protein n=2 Tax=root RepID=R5B1G5_9FIRM
High affinity branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX45301.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ABC transporter
L3_133_000M1_scaffold_1191_11
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(12698..13609)
DNA (912bp) protein (304aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=3 Tax=root RepID=R5APJ3_9FIRM
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX45300.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
branched-chain amino acid ABC transporter ATP-binding protein
L3_133_000M1_scaffold_1191_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(13602..14804)
DNA (1203bp) protein (401aa)
High affinity branched-chain amino acid ABC transporter permease protein n=2 Tax=root RepID=R5ATL3_9FIRM
High affinity branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCX45299.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
branched-chain amino acid ABC transporter permease protein
L3_133_000M1_scaffold_1191_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(14819..15694)
DNA (876bp) protein (292aa)
Inner-membrane translocator n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AQN9_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CCX45298.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
branched-chain amino acid ABC transporter permease protein
L3_133_000M1_scaffold_1191_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15841..17022)
DNA (1182bp) protein (394aa)
Extracellular ligand-binding receptor n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX32_9FIRM
Extracellular ligand-binding receptor {ECO:0000313|EMBL:CCX45297.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
branched-chain amino acid ABC transporter branched-chain amino acid-binding protein
L3_133_000M1_scaffold_1191_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(17187..18386)
DNA (1200bp) protein (400aa)
UPF0348 protein BN455_00612 n=2 Tax=root RepID=R5B1G1_9FIRM
UPF0348 protein BN455_00612 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_1191_16
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

18513..19634
DNA (1122bp) protein (374aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
ackA; acetate kinase (EC:2.7.2.1)
Acetate kinase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6ICM2_9FIRM
L3_133_000M1_scaffold_1191_17
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19667..20206)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KTM8_OSCVS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL00283.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_133_000M1_scaffold_1191_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


20337..20726
DNA (390bp) protein (130aa)
50S ribosomal protein L21 n=2 Tax=root RepID=R5ATK8_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rplU; 50S ribosomal protein L21
L3_133_000M1_scaffold_1191_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


20767..21030
DNA (264bp) protein (88aa)
50S ribosomal protein L27 n=2 Tax=root RepID=R5AQN4_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
50S ribosomal protein L27
L3_133_000M1_scaffold_1191_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

21112..22395
DNA (1284bp) protein (428aa)
GTPase Obg n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AX28_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
obg; GTP-binding protein Obg
L3_133_000M1_scaffold_1191_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22455..23297)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GKN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26018.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_133_000M1_scaffold_1191_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(23345..23998)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45281.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_1191_23
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24047..24469)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24QU0_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE85602.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_133_000M1_scaffold_1191_24
Verticillium dahliae, Verticillium, Glomerellales, Hypocreomycetidae, Ascomycota, Fungi

Not on your lists

24850..25848
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Pseudozyma antarctica (strain T-34) RepID=M9LSM6_PSEA3
Putative uncharacterized protein {ECO:0000313|EMBL:EGY16687.1}; TaxID=498257 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; mitosporic Plectosphaerellaceae; Verticillium.;" source="Verticillium dahliae (strain VdLs.17 / ATCC MYA-4575 / FGSC 10137); (Verticillium wilt).;"
hypothetical protein
L3_133_000M1_scaffold_1191_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

25919..26644
DNA (726bp) protein (242aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3N4_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCX46061.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_133_000M1_scaffold_1191_26
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


comp(26701..27057)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ARR8_9FIRM
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
LSU ribosomal protein L20P
L3_133_000M1_scaffold_1191_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists


comp(27088..27285)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=3 Tax=root RepID=R5AVU0_9FIRM
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rpmI; 50S ribosomal protein L35
L3_133_000M1_scaffold_1191_28

Not on your lists

comp(27311..27916)
DNA (606bp) protein (202aa)
Translation initiation factor IF-3 n=3 Tax=root RepID=R5ASY1_9FIRM
Translation initiation factor 3 {ECO:0000313|EMBL:EKC64511.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
infC; translation initiation factor IF-3
L3_133_000M1_scaffold_1191_29
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

28144..28536
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46057.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Predicted membrane protein
L3_133_000M1_scaffold_1191_30
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(28530..29270)
DNA (741bp) protein (247aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=2 Tax=root RepID=R5B3N1_9FIRM
Displaying items 1-30 of 40 in total

View Taxonomy