ggKbase home page

L3_133_000M1_scaffold_1468

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1468_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..345
DNA (345bp) protein (115aa)
Transcriptional regulatory protein, C-terminal domain protein n=6 Tax=root RepID=B0G6B9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23095.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
transcriptional regulator
L3_133_000M1_scaffold_1468_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(378..662)
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6C0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23096.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_133_000M1_scaffold_1468_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(718..1326)
DNA (609bp) protein (203aa)
Uncharacterized protein n=7 Tax=root RepID=B0G6C1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23097.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_4
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1326..1703)
DNA (378bp) protein (126aa)
Uncharacterized protein n=5 Tax=root RepID=K1TG81_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CDE20093.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
hypothetical protein
L3_133_000M1_scaffold_1468_5
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1684..2271)
DNA (588bp) protein (196aa)
Uncharacterized protein n=6 Tax=root RepID=R7G268_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23099.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_133_000M1_scaffold_1468_6
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2268..2516)
DNA (249bp) protein (83aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23100.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_7
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2536..3054)
DNA (519bp) protein (173aa)
Transcriptional regulator, AbrB family n=7 Tax=root RepID=B0G6C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23101.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
looped-hinge helix DNA binding domain, AbrB family
L3_133_000M1_scaffold_1468_8
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3117..3803)
DNA (687bp) protein (229aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6C6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97682.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_1468_9
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3820..5937)
DNA (2118bp) protein (706aa)
von Willebrand factor type A domain protein n=5 Tax=Clostridiales RepID=B0G6C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23103.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Nitric oxide reductase activation protein
L3_133_000M1_scaffold_1468_10
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5934..6200)
DNA (267bp) protein (89aa)
DNA-binding helix-turn-helix protein n=4 Tax=Clostridiales RepID=B0G6C8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23104.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_133_000M1_scaffold_1468_11
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6210..8021)
DNA (1812bp) protein (604aa)
Uncharacterized protein n=8 Tax=root RepID=B0G6C9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23105.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
MoxR-like ATPases
L3_133_000M1_scaffold_1468_12
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8038..8814)
DNA (777bp) protein (259aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6D0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97678.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_1468_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8956..9657)
DNA (702bp) protein (234aa)
Single-strand binding family protein n=5 Tax=Clostridiales RepID=B0G6D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23107.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Single-strand binding protein family.
L3_133_000M1_scaffold_1468_14
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9992..10681
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=4 Tax=Clostridiales RepID=B0G6D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23108.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000M1_scaffold_1468_15
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10768..11685
DNA (918bp) protein (306aa)
ABC transporter ATP-binding protein n=2 Tax=Clostridiales RepID=R7FXU0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23109.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
ABC-type multidrug transport system, ATPase component
L3_133_000M1_scaffold_1468_16
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11678..12529
DNA (852bp) protein (284aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=B0G6D5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI97674.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_1468_17
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12530..13426
DNA (897bp) protein (299aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=6 Tax=root RepID=B0G6D6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23111.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Signal transduction histidine kinase
L3_133_000M1_scaffold_1468_18
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13531..13815
DNA (285bp) protein (95aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6D7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23112.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_133_000M1_scaffold_1468_19
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13819..14151
DNA (333bp) protein (111aa)
Virulence-associated protein D (VapD) conserved region n=5 Tax=Clostridiales RepID=B0G6D8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23113.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
VapD domain protein
L3_133_000M1_scaffold_1468_20
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14381..14815
DNA (435bp) protein (145aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6D9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23114.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_21
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14819..15178
DNA (360bp) protein (120aa)
Uncharacterized protein n=5 Tax=root RepID=B0G6E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23115.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_22
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15180..16016
DNA (837bp) protein (279aa)
Uncharacterized protein n=7 Tax=root RepID=B0G6E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23116.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_23
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15973..16305
DNA (333bp) protein (111aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=B0G6E2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23117.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
L3_133_000M1_scaffold_1468_24
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16494..16940)
DNA (447bp) protein (149aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23118.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_1468_25
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16954..17640)
DNA (687bp) protein (229aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=B0G6E4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI96955.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
hypothetical protein
L3_133_000M1_scaffold_1468_26
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17661..18245)
DNA (585bp) protein (195aa)
Sigma-70 region 2 n=6 Tax=root RepID=B0G6E5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23120.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Sigma-70 region 2.
L3_133_000M1_scaffold_1468_27
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18262..18681)
DNA (420bp) protein (140aa)
Uncharacterized protein n=6 Tax=root RepID=B0G6E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23121.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF3268).
L3_133_000M1_scaffold_1468_28
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18933..19190)
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=root RepID=B0G6E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR46708.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
L3_133_000M1_scaffold_1468_29
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19610..23242)
DNA (3633bp) protein (1211aa)
Uncharacterized protein n=6 Tax=root RepID=V8C6U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23123.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Cna protein B-type domain.
L3_133_000M1_scaffold_1468_30
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23299..26496)
DNA (3198bp) protein (1066aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C6Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23124.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
Displaying items 1-30 of 56 in total

View Taxonomy