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L3_133_000M1_scaffold_1507

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1507_1
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(640..870)
DNA (231bp) protein (77aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8S333_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13238.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_133_000M1_scaffold_1507_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(931..2208)
DNA (1278bp) protein (426aa)
2,3-diketo-5-methylthiopentyl-1-phosphate enolase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YMX5_9CLOT
2,3-diketo-5-methylthiopentyl-1-phosphate enolase {ECO:0000313|EMBL:ENZ09614.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
RuBisCO-like protein
L3_133_000M1_scaffold_1507_3
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2328..3053)
DNA (726bp) protein (242aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A1H3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ48663.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
GntR family transcriptional regulator
L3_133_000M1_scaffold_1507_4
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3076..3249)
DNA (174bp) protein (58aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X2S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13241.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
L3_133_000M1_scaffold_1507_5
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3523..4287)
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=R0A8X6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ48665.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
hypothetical protein
L3_133_000M1_scaffold_1507_6
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4370..4717)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YPA8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09617.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_1507_7
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4826..5830)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S339_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ30971.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
Zn-dependent hydrolase
L3_133_000M1_scaffold_1507_8
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5928..6887)
DNA (960bp) protein (320aa)
Uncharacterized protein n=5 Tax=Clostridium RepID=A8S340_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13244.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Ribose ABC transport system, permease protein RbsC
L3_133_000M1_scaffold_1507_9
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6902..7852)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X374_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09620.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ribose ABC transporter permease protein
L3_133_000M1_scaffold_1507_10
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7839..9494)
DNA (1656bp) protein (552aa)
Ribose ABC transporter ATP-binding protein n=3 Tax=Clostridium RepID=N9X2T3_9CLOT
Ribose ABC transporter ATP-binding protein {ECO:0000313|EMBL:ENZ09621.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ABC transporter-like protein
L3_133_000M1_scaffold_1507_11
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9473..10594)
DNA (1122bp) protein (374aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=3 Tax=Clostridium RepID=N9YPB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ48670.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_133_000M1_scaffold_1507_12
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10927..11670)
DNA (744bp) protein (248aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YCJ3_9CLOT
L3_133_000M1_scaffold_1507_13
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11772..12806)
DNA (1035bp) protein (345aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=4 Tax=Clostridium RepID=N9YMY8_9CLOT
L3_133_000M1_scaffold_1507_14
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12855..13730)
DNA (876bp) protein (292aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Ribonuclease Z n=3 Tax=Clostridium RepID=N9X378_9CLOT
ribonuclease Z
L3_133_000M1_scaffold_1507_15
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13983..14786)
DNA (804bp) protein (268aa)
Uncharacterized protein n=4 Tax=Clostridium bolteae RepID=A8S348_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP13252.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
Transcriptional regulator, DeoR family
L3_133_000M1_scaffold_1507_16
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15013..15471
DNA (459bp) protein (153aa)
rpiB_1; ribose-5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase B n=3 Tax=Clostridium RepID=N9YPC4_9CLOT
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:ENZ09627.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_1507_17
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15485..16276
DNA (792bp) protein (264aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YCK0_9CLOT
L3_133_000M1_scaffold_1507_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16294..17526
DNA (1233bp) protein (411aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YMZ4_9CLOT
L3_133_000M1_scaffold_1507_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17642..17884)
DNA (243bp) protein (81aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8S353_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ30959.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_133_000M1_scaffold_1507_20
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18020..18469)
DNA (450bp) protein (150aa)
Ribosomal-protein-alanine acetyltransferase n=4 Tax=Clostridium RepID=N9X2U3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97284.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
ribosomal-protein-alanine acetyltransferase
L3_133_000M1_scaffold_1507_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18554..19306)
DNA (753bp) protein (251aa)
Universal bacterial protein YeaZ n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YPD0_9CLOT
Universal bacterial protein YeaZ {ECO:0000313|EMBL:ENZ09632.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_133_000M1_scaffold_1507_22
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19303..19731)
DNA (429bp) protein (143aa)
YjeE family ATPase n=4 Tax=Clostridium RepID=N9YCK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX97286.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
conserved hypothetical nucleotide-binding protein
L3_133_000M1_scaffold_1507_23
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19750..21897)
DNA (2148bp) protein (716aa)
Competence protein ComEA helix-hairpin-helix repeat region n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YMZ9_9CLOT
Competence protein ComEA helix-hairpin-helix repeat region {ECO:0000313|EMBL:ENZ09634.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Tex-like protein
L3_133_000M1_scaffold_1507_24
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22111..22566
DNA (456bp) protein (152aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=N9X389_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09635.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
L3_133_000M1_scaffold_1507_25
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22636..23001)
DNA (366bp) protein (122aa)
Uncharacterized protein n=4 Tax=Clostridium RepID=N9X2U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09636.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_133_000M1_scaffold_1507_26
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23005..24105)
DNA (1101bp) protein (367aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
Homoserine dehydrogenase n=4 Tax=Clostridium RepID=N9YPD7_9CLOT
homoserine dehydrogenase
L3_133_000M1_scaffold_1507_27
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24163..24606)
DNA (444bp) protein (148aa)
UPF0735 ACT domain-containing protein CLOBOL_06505 n=18 Tax=Clostridium RepID=A8S362_9CLOT
UPF0735 ACT domain-containing protein BN723_02230 {ECO:0000256|HAMAP-Rule:MF_00707}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
amino acid-binding ACT protein
L3_133_000M1_scaffold_1507_28
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24791..25810)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=7 Tax=Clostridium RepID=A8S363_9CLOT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
L3_133_000M1_scaffold_1507_29
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26005..28578)
DNA (2574bp) protein (858aa)
Protein translocase subunit SecA n=4 Tax=Clostridium RepID=N9X395_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
Preprotein translocase subunit SecA
L3_133_000M1_scaffold_1507_30
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29304..29834
DNA (531bp) protein (177aa)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8S366_9CLOT
Ribosomal subunit interface protein {ECO:0000313|EMBL:ENZ09641.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
ribosomal subunit interface protein
Displaying items 1-30 of 53 in total

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