ggKbase home page

L3_133_000M1_scaffold_1571

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1571_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(498..1964)
DNA (1467bp) protein (489aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YD82_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19617.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_133_000M1_scaffold_1571_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2027..3157)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YB76_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19616.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_133_000M1_scaffold_1571_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3170..3586)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZFV5_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19615.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_133_000M1_scaffold_1571_4
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3586..3960)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NLH4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16725.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_133_000M1_scaffold_1571_5
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3983..5098)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NVA9_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS13668.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_133_000M1_scaffold_1571_6
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5154..6629)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3Y0N6_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH15896.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_133_000M1_scaffold_1571_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6687..7247)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=S3Y2B7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH15897.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Protein of unknown function (DUF3575).
L3_133_000M1_scaffold_1571_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7286..7660)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YE58_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH15898.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_133_000M1_scaffold_1571_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8036..8992)
DNA (957bp) protein (319aa)
Site-specific recombinase, phage integrase family n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NPV1_BACSE
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDS16050.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
integrase
L3_133_000M1_scaffold_1571_10
unknown

Not on your lists

comp(8989..9168)
DNA (180bp) protein (60aa)

This feature has no annotations

L3_133_000M1_scaffold_1571_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9937..10461
DNA (525bp) protein (175aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
ferroxidase (EC:1.16.3.1)
Ferritin n=3 Tax=Bacteroides RepID=B0NML1_BACSE
L3_133_000M1_scaffold_1571_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11125..12312)
DNA (1188bp) protein (396aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
kbl; 2-amino-3-ketobutyrate coenzyme A ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZGD7_BACSE
L3_133_000M1_scaffold_1571_13
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12468..13424
DNA (957bp) protein (319aa)
L-threonine 3-dehydrogenase (EC:1.1.1.103)
NAD dependent epimerase/dehydratase family protein n=3 Tax=Bacteroides RepID=B0NMK7_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH19799.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
L3_133_000M1_scaffold_1571_14
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13444..14292
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6AQ48_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48726.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_133_000M1_scaffold_1571_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14298..15281
DNA (984bp) protein (328aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Bacteroides stercoris CC31F RepID=S3YDQ2_BACSE
L3_133_000M1_scaffold_1571_16
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15310..16074
DNA (765bp) protein (255aa)
Metallo-beta-lactamase domain protein n=2 Tax=Bacteroides RepID=B0NMK4_BACSE
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:CDA48724.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hydrolase
L3_133_000M1_scaffold_1571_17
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16147..17811
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A9Z2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA48723.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_133_000M1_scaffold_1571_18
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18113..18490)
DNA (378bp) protein (126aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NMK1_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16578.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_133_000M1_scaffold_1571_19
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18645..19769
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
DNA polymerase III, beta subunit (EC:2.7.7.7)
DNA polymerase III subunit beta n=3 Tax=Bacteroides RepID=B0NMK0_BACSE
L3_133_000M1_scaffold_1571_20
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19895..20665
DNA (771bp) protein (257aa)
Exonuclease n=3 Tax=Bacteroides RepID=B0NMJ9_BACSE
Exonuclease {ECO:0000313|EMBL:EDS16576.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Exonuclease RNase T and DNA polymerase III
L3_133_000M1_scaffold_1571_21
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20690..21913
DNA (1224bp) protein (408aa)
phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase (EC:4.1.1.36 6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=3 Tax=Bacteroides RepID=B0NMJ8_BACSE
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDA48719.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_133_000M1_scaffold_1571_22
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21954..23615
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Bacteroides stercoris CC31F RepID=S3ZGC5_BACSE
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
DNA replication and repair protein RecN
L3_133_000M1_scaffold_1571_23
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23711..24451
DNA (741bp) protein (247aa)
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Bacteroides stercoris RepID=B0NMJ6_BACSE
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:EPH19789.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
RNA methyltransferase, TrmH family, group 3
L3_133_000M1_scaffold_1571_24
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24454..26160
DNA (1707bp) protein (569aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A9Y2_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDA48713.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_133_000M1_scaffold_1571_25
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26265..26393
DNA (129bp) protein (43aa)
Uncharacterized protein n=2 Tax=Bacteroides stercoris RepID=B0NMJ4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS16571.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_133_000M1_scaffold_1571_26
Bacteroides clarus CAG:160, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26406..26780
DNA (375bp) protein (125aa)
Putative endoribonuclease L-PSP n=2 Tax=Bacteroides RepID=F3PHM8_9BACE
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:CDB84009.1}; TaxID=1263039 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides clarus CAG:160.;"
endoribonuclease L-PSP
L3_133_000M1_scaffold_1571_27
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26748..28001)
DNA (1254bp) protein (418aa)
FolC bifunctional protein (EC:6.3.2.17)
Bifunctional protein FolC n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NML8_BACSE
Bifunctional protein FolC {ECO:0000313|EMBL:EDS16569.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
L3_133_000M1_scaffold_1571_28

Not on your lists

28154..29389
DNA (1236bp) protein (412aa)
PhoH family protein n=1 Tax=gut metagenome RepID=J9FX39_9ZZZZ
PhoH-like protein
PhoH family protein {ECO:0000313|EMBL:EJW99088.1}; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
L3_133_000M1_scaffold_1571_29
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29498..30100)
DNA (603bp) protein (201aa)
Dihydroorotate dehydrogenase 2 n=2 Tax=Bacteroides RepID=R6AIR4_9BACE
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:CDA48709.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
dihydroorotate oxidase
L3_133_000M1_scaffold_1571_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30189..30392)
DNA (204bp) protein (68aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EDS16567.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EDS16567.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Dihydroorotate dehydrogenase 2 n=2 Tax=Bacteroides RepID=R6AIR4_9BACE
dihydroorotate oxidase
Displaying items 1-30 of 51 in total

View Taxonomy