ggKbase home page

L3_133_000M1_scaffold_1811

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1811_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

280..2115
DNA (1836bp) protein (612aa)
2-oxoacid:acceptor oxidoreductase, alpha subunit n=4 Tax=root RepID=A7V8V2_BACUN
2-oxoacid:acceptor oxidoreductase, alpha subunit {ECO:0000313|EMBL:EDO52408.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
L3_133_000M1_scaffold_1811_2
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2215..3219
DNA (1005bp) protein (335aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta n=6 Tax=Bacteroides RepID=D2EXR9_9BACE
Thiamine pyrophosphate enzyme {ECO:0000313|EMBL:EFV27292.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
2-oxoacid:ferredoxin oxidoreductase subunit beta
L3_133_000M1_scaffold_1811_3
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3862..7230
DNA (3369bp) protein (1123aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Bacteroides uniformis RepID=I8ZJN9_BACUN
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFA20453.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
TonB dependent receptor
L3_133_000M1_scaffold_1811_4
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7262..8944
DNA (1683bp) protein (561aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=D2EXR6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20452.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1811_5
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9246..10304
DNA (1059bp) protein (353aa)
AMP-binding enzyme n=2 Tax=Bacteroides RepID=D2EXR5_9BACE
AMP-binding enzyme {ECO:0000313|EMBL:EFA20451.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
AMP-dependent synthetase/ligase
L3_133_000M1_scaffold_1811_6
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10369..10704
DNA (336bp) protein (112aa)
Amino acid adenylation domain-containing protein n=2 Tax=Bacteroides uniformis RepID=I8ZL78_BACUN
AMP-binding enzyme {ECO:0000313|EMBL:EFV27288.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
AMP-dependent synthetase/ligase
L3_133_000M1_scaffold_1811_7
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10713..10955
DNA (243bp) protein (81aa)
Uncharacterized protein n=7 Tax=Bacteroides RepID=A7V8V9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EIY75753.1}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
acyl carrier protein
L3_133_000M1_scaffold_1811_8
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10959..12347
DNA (1389bp) protein (463aa)
MBOAT family protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V8W0_BACUN
MBOAT family protein {ECO:0000313|EMBL:EDO52416.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
membrane bound O-acyl transferase MBOAT family protein
L3_133_000M1_scaffold_1811_9
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12360..13448
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D20 RepID=D2EXR2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EFA20448.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1811_10
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13391..14050)
DNA (660bp) protein (220aa)
Uracil phosphoribosyltransferase {ECO:0000313|EMBL:EFA20447.1}; EC=2.4.2.9 {ECO:0000313|EMBL:EFA20447.1};; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Bacteroides sp. D20 RepID=D2EXR1_9BACE
L3_133_000M1_scaffold_1811_11
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14343..15950
DNA (1608bp) protein (536aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=5 Tax=Bacteroides RepID=A7V8W4_BACUN
L3_133_000M1_scaffold_1811_12
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16088..16735
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I3L2_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10691.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
NADH dehydrogenase
L3_133_000M1_scaffold_1811_13
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16826..17854)
DNA (1029bp) protein (343aa)
GTP-binding protein TypA n=8 Tax=root RepID=A7V8W7_BACUN
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EFV27281.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
GTP-binding elongation factor family protein TypA/BipA
L3_133_000M1_scaffold_1811_14
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17842..18561)
DNA (720bp) protein (240aa)
GTP-binding protein TypA n=8 Tax=root RepID=A7V8W7_BACUN
GTP-binding protein TypA {ECO:0000313|EMBL:EFA20444.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
GTP-binding protein TypA
L3_133_000M1_scaffold_1811_15
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


18720..18989
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=6 Tax=Bacteroides RepID=A7V8W8_BACUN
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=997890 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis CL03T12C37.;"
SSU ribosomal protein S15P
L3_133_000M1_scaffold_1811_16
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19082..19969
DNA (888bp) protein (296aa)
Transcriptional regulatory protein, C-terminal domain protein n=3 Tax=Bacteroides RepID=D2EXQ6_9BACE
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EFA20442.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1811_17
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19983..20471
DNA (489bp) protein (163aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=A7V8X1_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EFA20441.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1811_18
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20528..21340
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis dnLKV2 RepID=R9I3K8_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EOS10686.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
collagen-binding protein
L3_133_000M1_scaffold_1811_19
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21569..22870
DNA (1302bp) protein (434aa)
TonB-dependent receptor n=2 Tax=Bacteroides RepID=A7V8X2_BACUN
Outer membrane insertion C-terminal signal domain protein {ECO:0000313|EMBL:KDS47909.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
TonB-dependent receptor
L3_133_000M1_scaffold_1811_20
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23048..23623
DNA (576bp) protein (192aa)
DNA-binding helix-turn-helix protein n=7 Tax=Bacteroides RepID=A7V8X3_BACUN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EFA20439.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
transcriptional regulator
L3_133_000M1_scaffold_1811_21
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23656..25266
DNA (1611bp) protein (537aa)
AMP-binding protein (EC:2.3.1.86)
AMP-binding enzyme n=2 Tax=Bacteroides RepID=E5V793_9BACE
AMP-binding enzyme {ECO:0000313|EMBL:EFV27275.1}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
L3_133_000M1_scaffold_1811_22
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25372..25725)
DNA (354bp) protein (118aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
quorum-sensing autoinducer 2 (AI-2), LuxS (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Bacteroides sp. D20 RepID=D2EXQ1_9BACE
L3_133_000M1_scaffold_1811_23
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25793..26497)
DNA (705bp) protein (235aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
methylthioadenosine nucleosidase (EC:3.2.2.16)
MTA/SAH nucleosidase n=5 Tax=root RepID=A7V8X7_BACUN
L3_133_000M1_scaffold_1811_24
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27217..29160
DNA (1944bp) protein (648aa)
Uncharacterized protein n=1 Tax=Bacteroides uniformis ATCC 8492 RepID=A7V8X9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EDO52435.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
hypothetical protein
L3_133_000M1_scaffold_1811_25
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29856..30188
DNA (333bp) protein (111aa)
Ribosome-binding factor A n=6 Tax=Bacteroides RepID=A7V8Y2_BACUN
Ribosome-binding factor A {ECO:0000313|EMBL:EDO52438.1}; TaxID=411479 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis ATCC 8492.;"
ribosome-binding factor A
L3_133_000M1_scaffold_1811_26
Bacteroides sp. D20, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30188..31423
DNA (1236bp) protein (412aa)
Efflux ABC transporter, permease protein n=4 Tax=Bacteroides RepID=A7V8Y3_BACUN
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EFA20433.1}; TaxID=585543 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D20.;"
hypothetical protein
L3_133_000M1_scaffold_1811_27
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31461..31991)
DNA (531bp) protein (177aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I9U107_BACUN
Methyltransferase domain protein {ECO:0000313|EMBL:KDS47919.1}; TaxID=1339349 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis str. 3978 T3 ii.;"
O-methyltransferase 3
L3_133_000M1_scaffold_1811_28
Bacteroides sp. CAG:633, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32110..33471)
DNA (1362bp) protein (454aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262744 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:633.;"
pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Bacteroides sp. CAG:633 RepID=R6FG46_9BACE
L3_133_000M1_scaffold_1811_29
Bacteroides uniformis CAG:3, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33492..33911)
DNA (420bp) protein (140aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1263055 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides uniformis CAG:3.;"
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=5 Tax=Bacteroides RepID=D2EXP4_9BACE
L3_133_000M1_scaffold_1811_30
Bacteroides sp. 4_1_36, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34030..34983
DNA (954bp) protein (318aa)
Tyrosine recombinase XerC n=5 Tax=Bacteroides RepID=A7V8Y7_BACUN
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=457393 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 4_1_36.;"
tyrosine recombinase XerD subunit
Displaying items 1-30 of 80 in total

View Taxonomy