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L3_133_000M1_scaffold_1983

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1983_1
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(49..1989)
DNA (1941bp) protein (647aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3)
Threonine--tRNA ligase n=3 Tax=Bacteroides RepID=B0NR85_BACSE
L3_133_000M1_scaffold_1983_2
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2069..4114)
DNA (2046bp) protein (682aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YHQ0_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21142.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
hypothetical protein
L3_133_000M1_scaffold_1983_3
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4232..4786)
DNA (555bp) protein (185aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=3 Tax=Bacteroides RepID=B0NR83_BACSE
L3_133_000M1_scaffold_1983_4
Bacteroides clarus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4825..5250)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=762984 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides clarus YIT 12056.;"
Putative Holliday junction resolvase n=4 Tax=Bacteroides RepID=B0NR82_BACSE
Holliday junction resolvase YqgF
L3_133_000M1_scaffold_1983_5
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5397..6341)
DNA (945bp) protein (315aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NR81_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46911.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
hypothetical protein
L3_133_000M1_scaffold_1983_6
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6385..7491)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CAG:120 RepID=R6A7G7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDA46910.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
possible sulfotransferase
L3_133_000M1_scaffold_1983_7
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7589..9049)
DNA (1461bp) protein (487aa)
Sulfate adenylyltransferase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00056000}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00062, ECO:0000256|SAAS:SAAS00055979};; ATP-sulfurylase large subunit {ECO:0000256|HAMAP-Rule:MF_00062}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00062}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
sulfate adenylyltransferase subunit 1 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 1 n=3 Tax=Bacteroides RepID=B0NR79_BACSE
L3_133_000M1_scaffold_1983_8
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9083..9994)
DNA (912bp) protein (304aa)
Sulfate adenylyltransferase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00064}; EC=2.7.7.4 {ECO:0000256|HAMAP-Rule:MF_00064};; ATP-sulfurylase small subunit {ECO:0000256|HAMAP-Rule:MF_00064}; Sulfate adenylate transferase {ECO:0000256|HAMAP-Rule:MF_00064}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
sulfate adenylyltransferase subunit 2 (EC:2.7.7.4)
Sulfate adenylyltransferase subunit 2 n=2 Tax=Bacteroides stercoris RepID=B0NR78_BACSE
L3_133_000M1_scaffold_1983_9
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10001..10603)
DNA (603bp) protein (201aa)
Adenylyl-sulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347}; EC=2.7.1.25 {ECO:0000256|HAMAP-Rule:MF_00065, ECO:0000256|RuleBase:RU004347};; APS kinase {ECO:0000256|HAMAP-Rule:MF_00065}; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00065}; Adenosine-5'-phosphosulfate kinase {ECO:0000256|HAMAP-Rule:MF_00065}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
adenylylsulfate kinase (EC:2.7.1.25)
Adenylyl-sulfate kinase n=3 Tax=Bacteroides RepID=B0NR77_BACSE
L3_133_000M1_scaffold_1983_10
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10611..12164)
DNA (1554bp) protein (518aa)
Citrate transporter n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR76_BACSE
Citrate transporter {ECO:0000313|EMBL:EDS15375.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
TrkA-C domain protein
L3_133_000M1_scaffold_1983_11
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12181..12996)
DNA (816bp) protein (272aa)
3'(2'),5'-bisphosphate nucleotidase {ECO:0000313|EMBL:EDS15374.1}; EC=3.1.3.7 {ECO:0000313|EMBL:EDS15374.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
3'(2'),5'-bisphosphate nucleotidase (EC:3.1.3.7)
3'(2'),5'-bisphosphate nucleotidase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR75_BACSE
L3_133_000M1_scaffold_1983_12
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13239..13670)
DNA (432bp) protein (144aa)
Sporulation and cell division repeat protein n=3 Tax=Bacteroides RepID=B0NR73_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EPH21152.1}; TaxID=1073351 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris CC31F.;"
Sporulation domain-containing protein
L3_133_000M1_scaffold_1983_13
Bacteroides stercoris CAG:120, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13720..14172)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YU92_BACSE
Uncharacterized protein {ECO:0000313|EMBL:CDA46900.1}; TaxID=1263053 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides stercoris CAG:120.;"
L3_133_000M1_scaffold_1983_14
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14374..14583
DNA (210bp) protein (70aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NR69_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15368.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_133_000M1_scaffold_1983_15
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14613..14975
DNA (363bp) protein (121aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=B0NR68_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15367.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_133_000M1_scaffold_1983_16
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14982..15242
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR67_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15366.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
hypothetical protein
L3_133_000M1_scaffold_1983_17
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15281..16093)
DNA (813bp) protein (271aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDS15365.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDS15365.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR66_BACSE
glycosyltransferase
L3_133_000M1_scaffold_1983_18
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16106..17143)
DNA (1038bp) protein (346aa)
group 1 glycosyl transferase n=1 Tax=Bacteroides faecis RepID=UPI000262E978
Glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:CDN30365.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L3_133_000M1_scaffold_1983_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17153..18151)
DNA (999bp) protein (333aa)
Putative glycosyltransferase n=1 Tax=Bacteroides thetaiotaomicron CAG:40 RepID=R7KPH2_9BACE
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EXZ31544.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
glycosyltransferase
L3_133_000M1_scaffold_1983_20
Mucinivorans hirudinis, Mucinivorans, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18185..19390)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Bacteroides vulgatus (strain ATCC 8482 / DSM 1447 / NCTC 11154) RepID=A6L138_BACV8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDN32796.1}; TaxID=1433126 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Mucinivorans.;" source="Mucinivorans hirudinis.;"
L3_133_000M1_scaffold_1983_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19392..20546)
DNA (1155bp) protein (385aa)
glycosyl transferase (EC:2.4.1.-)
Glycosyl transferase, group 1 family protein n=2 Tax=Clostridium perfringens RepID=B1BNG5_CLOPF
Glycosyl transferase, group 1 family protein {ECO:0000313|EMBL:EDT16695.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_133_000M1_scaffold_1983_22
Prevotella buccae, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20590..22026)
DNA (1437bp) protein (479aa)
Polysaccharide biosynthesis protein n=1 Tax=Prevotella buccae ATCC 33574 RepID=E6K7Q0_9BACT
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFU30203.1}; TaxID=873513 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella buccae ATCC 33574.;"
polysaccharide transporter protein
L3_133_000M1_scaffold_1983_23
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22013..23029)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0PKW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88412.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_133_000M1_scaffold_1983_24
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23068..23742)
DNA (675bp) protein (225aa)
LicC protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PXT3_9BACE
LicC protein {ECO:0000313|EMBL:EGF51665.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
licC; lic-1 operon protein
L3_133_000M1_scaffold_1983_25
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23744..25276)
DNA (1533bp) protein (511aa)
Transporter, betaine/carnitine/choline family n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PXT2_9BACE
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:EGF51664.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
choline/carnitine/betaine transporter family protein
L3_133_000M1_scaffold_1983_26
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25273..26880)
DNA (1608bp) protein (536aa)
Choline/ethanolamine kinase n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PXT1_9BACE
Choline/ethanolamine kinase {ECO:0000313|EMBL:EGF51663.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
choline kinase
L3_133_000M1_scaffold_1983_27
Bacteroides fluxus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26880..27629)
DNA (750bp) protein (250aa)
Conserved domain protein n=1 Tax=Bacteroides fluxus YIT 12057 RepID=F3PXT0_9BACE
Conserved domain protein {ECO:0000313|EMBL:EGF51662.1}; TaxID=763034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fluxus YIT 12057.;"
L3_133_000M1_scaffold_1983_28
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27643..28278)
DNA (636bp) protein (212aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EDS15355.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDS15355.1};; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
Bacterial sugar transferase n=1 Tax=Bacteroides stercoris ATCC 43183 RepID=B0NR56_BACSE
sugar transferase
L3_133_000M1_scaffold_1983_29
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28332..28679)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bacteroides stercoris CC31F RepID=S3YDT4_BACSE
Uncharacterized protein {ECO:0000313|EMBL:EDS15354.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
conserved hypothetical protein UpxZ homolog
L3_133_000M1_scaffold_1983_30
Bacteroides stercoris, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28726..29277)
DNA (552bp) protein (184aa)
Transcription termination/antitermination factor NusG n=2 Tax=Bacteroides RepID=B0NR54_BACSE
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EDS15353.1}; TaxID=449673 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides stercoris ATCC 43183.;"
putative transcriptional regulator UpxY homolog
Displaying items 1-30 of 37 in total

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