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L3_133_000M1_scaffold_85

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_85_1
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2..241
DNA (240bp) protein (80aa)
Flavin reductase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5M8_9ACTN
Flavin reductase {ECO:0000313|EMBL:CDA36422.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_85_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(350..1444)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75492.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Archaeal ATPase.
L3_133_000M1_scaffold_85_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(1693..3933)
DNA (2241bp) protein (747aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase/topoisomerase IV A subunit n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZII7_9ACTN
DNA gyrase/topoisomerase IV A subunit {ECO:0000313|EMBL:CDA36424.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_85_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3979..5976)
DNA (1998bp) protein (666aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
DNA gyrase, B subunit, C-terminal domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B6_9ACTN
DNA gyrase, B subunit, C-terminal domain protein {ECO:0000313|EMBL:EBA40132.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_133_000M1_scaffold_85_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6370..10734)
DNA (4365bp) protein (1455aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75497.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_133_000M1_scaffold_85_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10891..11895)
DNA (1005bp) protein (335aa)
Transcriptional regulator, LuxR family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8B2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75498.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_133_000M1_scaffold_85_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11964..13115)
DNA (1152bp) protein (384aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A5_9ACTN
Signal transduction histidine kinase
L3_133_000M1_scaffold_85_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13112..13786)
DNA (675bp) protein (225aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA94_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75500.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_133_000M1_scaffold_85_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14049..14918
DNA (870bp) protein (290aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ32_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75502.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
4Fe-4S ferredoxin
L3_133_000M1_scaffold_85_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14948..15919
DNA (972bp) protein (324aa)
Redoxin family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZJ28_9ACTN
Redoxin family protein {ECO:0000313|EMBL:CDA36599.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
redoxin domain-containing protein
L3_133_000M1_scaffold_85_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16174..19428
DNA (3255bp) protein (1085aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8A1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75504.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter-like protein
L3_133_000M1_scaffold_85_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19482..20435
DNA (954bp) protein (318aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA-dihydrouridine synthase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB36_9ACTN
tRNA-U20a,U20b-dihydrouridine synthase
L3_133_000M1_scaffold_85_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20579..20845)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZML9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA35551.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_85_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21683..21928)
DNA (246bp) protein (82aa)
Glutaredoxin n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIU9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75450.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
glutaredoxin
L3_133_000M1_scaffold_85_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21980..22807)
DNA (828bp) protein (276aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA10_9ACTN
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:CDA36503.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Predicted transcriptional regulators
L3_133_000M1_scaffold_85_16
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22940..23686
DNA (747bp) protein (249aa)
Methyltransferase YaeB family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Z4_9ACTN
Methyltransferase YaeB family {ECO:0000313|EMBL:CDA36502.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
conserved hypothetical protein TIGR00104
L3_133_000M1_scaffold_85_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23799..25013
DNA (1215bp) protein (405aa)
PLP-dependent aminotransferase (EC:4.4.1.8)
Aminotransferase class I/II n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ85_9ACTN
Aminotransferase class I/II {ECO:0000313|EMBL:CDA36501.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_85_18
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25158..26027
DNA (870bp) protein (290aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E886_9ACTN
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EBA40102.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_133_000M1_scaffold_85_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26024..28216
DNA (2193bp) protein (731aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIT8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75455.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Signal transduction histidine kinase
L3_133_000M1_scaffold_85_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28286..28765)
DNA (480bp) protein (160aa)
5-nitroimidazole antibiotic resistance protein NimB n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZA02_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75456.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Predicted flavin-nucleotide-binding protein
L3_133_000M1_scaffold_85_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28808..31645)
DNA (2838bp) protein (946aa)
amino acid-binding domain sensor hybrid histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A5Y4_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA36497.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_85_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31811..32236
DNA (426bp) protein (142aa)
Ion channel n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ74_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75459.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Ion channel.
L3_133_000M1_scaffold_85_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32272..32805
DNA (534bp) protein (178aa)
TIGR00730 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E880_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75460.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
conserved hypothetical protein, DprA/Smf-related, family 2
L3_133_000M1_scaffold_85_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32931..34235
DNA (1305bp) protein (435aa)
Chloride transporter, ClC family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E879_9ACTN
Chloride transporter, ClC family {ECO:0000313|EMBL:EBA40095.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Chloride channel protein EriC
L3_133_000M1_scaffold_85_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34320..35018)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E877_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40093.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_133_000M1_scaffold_85_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35015..35896)
DNA (882bp) protein (294aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E876_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA40092.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter ATP-binding component
L3_133_000M1_scaffold_85_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(35920..36300)
DNA (381bp) protein (127aa)
Transcriptional regulator GntR family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZQ47_9ACTN
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA36491.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
putative transcriptional regulator
L3_133_000M1_scaffold_85_28
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36516..38129
DNA (1614bp) protein (538aa)
Peptide chain release factor 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZCA4_9ACTN
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
bacterial peptide chain release factor 3 (bRF-3)
L3_133_000M1_scaffold_85_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

38286..39008
DNA (723bp) protein (241aa)
Putative membrane protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIQ5_9ACTN
Putative membrane protein {ECO:0000313|EMBL:CDA36489.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_85_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

39018..39698
DNA (681bp) protein (227aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E871_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75467.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Displaying items 1-30 of 74 in total

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