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L3_133_000M1_scaffold_597

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_597_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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235..876
DNA (642bp) protein (214aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ9_9ACTN
L3_133_000M1_scaffold_597_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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869..1450
DNA (582bp) protein (194aa)
Transglycosylase SLT domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ8_9ACTN
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EBA38668.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Lytic transglycosylase catalytic
L3_133_000M1_scaffold_597_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1502..3742
DNA (2241bp) protein (747aa)
UvrABC system protein B n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A7_9ACTN
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit B
L3_133_000M1_scaffold_597_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(3808..5448)
DNA (1641bp) protein (547aa)
FAD dependent oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72545.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FAD dependent oxidoreductase
L3_133_000M1_scaffold_597_5
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(5529..6800)
DNA (1272bp) protein (424aa)
Flavoprotein family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72544.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_133_000M1_scaffold_597_6
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(6801..7631)
DNA (831bp) protein (277aa)
Nucleotide-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ4_9ACTN
Nucleotide-binding protein {ECO:0000313|EMBL:EBA38664.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ParA/MinD-like ATPase
L3_133_000M1_scaffold_597_7
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7777..9930)
DNA (2154bp) protein (718aa)
Arylsulfatase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72542.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
sulfatase
L3_133_000M1_scaffold_597_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10124..13003
DNA (2880bp) protein (960aa)
UvrABC system protein A n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECQ0_9ACTN
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
excinuclease ABC subunit A
L3_133_000M1_scaffold_597_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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13136..13636
DNA (501bp) protein (167aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=Collinsella RepID=A4ECP9_9ACTN
ybaK/ebsC protein
L3_133_000M1_scaffold_597_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

13640..15322
DNA (1683bp) protein (561aa)
Integral membrane protein MviN n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH99_9ACTN
Integral membrane protein MviN {ECO:0000313|EMBL:CDA35949.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
virulence factor MVIN family protein
L3_133_000M1_scaffold_597_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15329..17269
DNA (1941bp) protein (647aa)
UvrABC system protein C n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAT7_9ACTN
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
excinuclease ABC subunit C
L3_133_000M1_scaffold_597_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

17635..19248
DNA (1614bp) protein (538aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNK0_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA35951.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
family 5 extracellular solute-binding protein
L3_133_000M1_scaffold_597_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19404..20360
DNA (957bp) protein (319aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A496_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA35952.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000M1_scaffold_597_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20364..22379
DNA (2016bp) protein (672aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D5_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35953.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_133_000M1_scaffold_597_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22380..23207
DNA (828bp) protein (276aa)
ABC transporter, ATP-binding protein n=2 Tax=Collinsella RepID=A4ECP3_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA35954.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter-like protein
L3_133_000M1_scaffold_597_16
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23339..24265
DNA (927bp) protein (309aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECP2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72533.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Acetyl xylan esterase
L3_133_000M1_scaffold_597_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24258..25109
DNA (852bp) protein (284aa)
Acetyl xylan esterase (AXE1) n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECP1_9ACTN
Acetyl xylan esterase (AXE1) {ECO:0000313|EMBL:EBA38651.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Acetyl xylan esterase
L3_133_000M1_scaffold_597_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25178..26098
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4A3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72531.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
dihydrodipicolinate synthetase
L3_133_000M1_scaffold_597_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26272..27237
DNA (966bp) protein (322aa)
ROK family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8D9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI72530.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
transcriptional regulator/sugar kinase
L3_133_000M1_scaffold_597_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27379..28065
DNA (687bp) protein (229aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
Putative N-acetylmannosamine-6-phosphate 2-epimerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN8_9ACTN
L3_133_000M1_scaffold_597_21
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28167..29087
DNA (921bp) protein (307aa)
UPF0042 nucleotide-binding protein BN511_01214 n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAV9_9ACTN
Nucleotide-binding protein HMPREF9463_01954 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_133_000M1_scaffold_597_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29094..30023
DNA (930bp) protein (310aa)
Putative sporulation transcription regulator WhiA n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNL1_9ACTN
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_597_23
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

30217..31242
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN5_9ACTN
L3_133_000M1_scaffold_597_24
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

31383..32573
DNA (1191bp) protein (397aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN4_9ACTN
L3_133_000M1_scaffold_597_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

32566..33333
DNA (768bp) protein (256aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHC0_9ACTN
L3_133_000M1_scaffold_597_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33339..34892
DNA (1554bp) protein (518aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4ECN2_9ACTN
L3_133_000M1_scaffold_597_27
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35058..35312
DNA (255bp) protein (85aa)
Preprotein translocase, SecG subunit n=2 Tax=Collinsella RepID=A4ECN0_9ACTN
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CDA35966.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
preprotein translocase subunit SecG
Displaying 27 items

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