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L3_133_000M1_scaffold_1024

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1024_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(131..1342)
DNA (1212bp) protein (404aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAM0_9ACTN
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_133_000M1_scaffold_1024_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1413..1988)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39542.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_133_000M1_scaffold_1024_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1999..2565)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A533_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36242.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_1024_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


2698..4848
DNA (2151bp) protein (717aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
tRNA ligases class I (M) n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z976_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75023.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_133_000M1_scaffold_1024_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

5006..6109
DNA (1104bp) protein (368aa)
NOL1/NOP2/sun family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL5_9ACTN
NOL1/NOP2/sun family protein {ECO:0000313|EMBL:EBA39538.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Fmu (Sun) domain-containing protein
L3_133_000M1_scaffold_1024_6
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6134..6304)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBI9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36245.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_1024_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

6496..7587
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39536.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dioxygenase-like 2-nitropropane dioxygenase
L3_133_000M1_scaffold_1024_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7669..8559)
DNA (891bp) protein (297aa)
EDD domain protein, DegV family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL2_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EBA39534.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
degV family protein
L3_133_000M1_scaffold_1024_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

8879..10795
DNA (1917bp) protein (639aa)
Fructose-bisphosphatase {ECO:0000256|SAAS:SAAS00065010}; EC=3.1.3.11 {ECO:0000256|SAAS:SAAS00065010};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
fructose-bisphosphatase (EC:3.1.3.11)
Fructose-1 6-bisphosphatase class 3 n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z981_9ACTN
L3_133_000M1_scaffold_1024_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10874..11269
DNA (396bp) protein (132aa)
GtrA-like protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI27_9ACTN
GtrA-like protein {ECO:0000313|EMBL:CDA36249.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_1024_11
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11489..11896
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZBJ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36250.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_1024_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12056..12958)
DNA (903bp) protein (301aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA36251.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_1024_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12948..16781)
DNA (3834bp) protein (1278aa)
Repeat protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK5_9ACTN
Repeat protein {ECO:0000313|EMBL:EBA39528.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_133_000M1_scaffold_1024_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17219..18982)
DNA (1764bp) protein (588aa)
ABC1 family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z985_9ACTN
ABC1 family protein {ECO:0000313|EMBL:CDA36253.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter
L3_133_000M1_scaffold_1024_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18991..19407)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI30_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36254.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_133_000M1_scaffold_1024_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19507..21030)
DNA (1524bp) protein (508aa)
Peptidase, C69 family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK2_9ACTN
Peptidase, C69 family {ECO:0000313|EMBL:EBA39525.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dipeptidase A
L3_133_000M1_scaffold_1024_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21385..22239)
DNA (855bp) protein (285aa)
Bifunctional protein FolD n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE6_9ACTN
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+)
L3_133_000M1_scaffold_1024_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22242..22934)
DNA (693bp) protein (231aa)
Formiminotransferase-cyclodeaminase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A549_9ACTN
Formiminotransferase-cyclodeaminase {ECO:0000313|EMBL:CDA36257.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
methenyl tetrahydrofolate cyclohydrolase
L3_133_000M1_scaffold_1024_19
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23254..23853
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAJ8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39521.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_133_000M1_scaffold_1024_20
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24095..24415
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z988_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36258.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_133_000M1_scaffold_1024_21

Not on your lists

24512..24694
DNA (183bp) protein (61aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1U5F4_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC66666.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_133_000M1_scaffold_1024_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25000..25389
DNA (390bp) protein (130aa)
Phosphatidylinositol-specific phospholipase C X domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI35_9ACTN
Phosphatidylinositol-specific phospholipase C X domain protein {ECO:0000313|EMBL:CDA36259.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Displaying 22 items

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