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L3_133_000M1_scaffold_1123

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1123_1
Bifidobacterium angulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..269
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFK4_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KJX91357.1}; TaxID=1683 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium angulatum.;"
L3_133_000M1_scaffold_1123_2
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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262..663
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G8P1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEA91353.1}; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
hypothetical protein
L3_133_000M1_scaffold_1123_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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709..1371
DNA (663bp) protein (221aa)
Response regulator receiver domain protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FFK2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KGI75611.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein
L3_133_000M1_scaffold_1123_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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1398..2795
DNA (1398bp) protein (466aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8E0_9ACTN
histidine kinase
L3_133_000M1_scaffold_1123_5

Not on your lists

comp(3094..3393)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI0002484F29
Uncharacterized protein {ECO:0000313|EMBL:KKL93186.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_1123_6
Bifidobacterium cuniculi, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3782..6691)
DNA (2910bp) protein (970aa)
Uncharacterized protein n=1 Tax=Megasphaera sp. BL7 RepID=S7HIE0_9FIRM
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:KFI60936.1}; TaxID=1688 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium cuniculi.;"
type III restriction enzyme, res subunit
L3_133_000M1_scaffold_1123_7
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6694..8790)
DNA (2097bp) protein (699aa)
DNA methylase N-4/N-6 domain-containing protein n=1 Tax=Brevibacterium casei S18 RepID=K9B6E4_9MICO
DNA methyltransferase {ECO:0000313|EMBL:KEQ15834.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montiporae.;"
hypothetical protein
L3_133_000M1_scaffold_1123_8
unknown

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comp(8838..9005)
DNA (168bp) protein (56aa)

This feature has no annotations

L3_133_000M1_scaffold_1123_9
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9488..11086)
DNA (1599bp) protein (533aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I2_9ACTN
L3_133_000M1_scaffold_1123_10
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11354..12367
DNA (1014bp) protein (338aa)
L-asparaginase type I n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8X4_9ACTN
L-asparaginase type I {ECO:0000313|EMBL:CDA35305.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
type I L-asparaginase
L3_133_000M1_scaffold_1123_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(12689..12907)
DNA (219bp) protein (73aa)
DNA-binding helix-turn-helix protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I4_9ACTN
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EBA40200.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Predicted transcriptional regulator with C-terminal CBS domains
L3_133_000M1_scaffold_1123_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12984..13373
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75603.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_133_000M1_scaffold_1123_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13383..13766)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA40202.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_133_000M1_scaffold_1123_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(13778..14854)
DNA (1077bp) protein (359aa)
Ribosome-binding ATPase YchF n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I7_9ACTN
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
GTP-binding protein YchF
L3_133_000M1_scaffold_1123_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14969..16222)
DNA (1254bp) protein (418aa)
4Fe-4S binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I8_9ACTN
4Fe-4S binding domain protein {ECO:0000313|EMBL:EBA40204.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_133_000M1_scaffold_1123_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16374..17441)
DNA (1068bp) protein (356aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EBA40205.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EBA40205.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Alcohol dehydrogenase, iron-dependent n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8I9_9ACTN
L3_133_000M1_scaffold_1123_17
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17561..18784)
DNA (1224bp) protein (408aa)
Alcohol dehydrogenase iron-dependent n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPR6_9ACTN
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDA36381.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
iron-containing alcohol dehydrogenase
L3_133_000M1_scaffold_1123_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19285..20361
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8J3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75596.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
response regulator receiver and SARP domain-containing protein
L3_133_000M1_scaffold_1123_19
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20361..21404
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E8J4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75595.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_133_000M1_scaffold_1123_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21450..23627
DNA (2178bp) protein (726aa)
CobB/CobQ-like protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA27_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75594.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
Displaying 20 items

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