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L3_133_000M1_scaffold_1184

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_1184_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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comp(1..1086)
DNA (1086bp) protein (362aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX8_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA38871.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_133_000M1_scaffold_1184_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1353..2414
DNA (1062bp) protein (354aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EBA38870.1}; EC=5.1.3.2 {ECO:0000313|EMBL:EBA38870.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
UDP-glucose 4-epimerase n=2 Tax=Collinsella RepID=A4EBX7_9ACTN
UDP-glucose 4-epimerase
L3_133_000M1_scaffold_1184_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2635..4140
DNA (1506bp) protein (502aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX5_9ACTN
L3_133_000M1_scaffold_1184_4
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4269..6536
DNA (2268bp) protein (756aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
glycogen/starch/alpha-glucan phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHX6_9ACTN
L3_133_000M1_scaffold_1184_5
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6913..8112)
DNA (1200bp) protein (400aa)
ABC transporter ATP-binding protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBD9_9ACTN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA36175.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ABC transporter-like protein
L3_133_000M1_scaffold_1184_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8181..9020)
DNA (840bp) protein (280aa)
ABC transporter permease protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZP74_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73928.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000M1_scaffold_1184_7
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9020..9874)
DNA (855bp) protein (285aa)
ABC transporter, permease protein n=2 Tax=Collinsella RepID=A4EBX1_9ACTN
ABC transporter permease protein {ECO:0000313|EMBL:CDA36177.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
binding-protein-dependent transport system inner membrane protein
L3_133_000M1_scaffold_1184_8
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9962..11278)
DNA (1317bp) protein (439aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBX0_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA38863.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
family 1 extracellular solute-binding protein
L3_133_000M1_scaffold_1184_9
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11585..12304)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHX9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36179.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
GntR family transcriptional regulator
L3_133_000M1_scaffold_1184_10
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

12567..14984
DNA (2418bp) protein (806aa)
PTS system maltose-specific EIICB component {ECO:0000313|EMBL:EBA38859.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EBA38859.1};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
PTS system maltose-specific EIICB component n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW5_9ACTN
PTS system maltose-specific IIB/IIC components
L3_133_000M1_scaffold_1184_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15098..16123
DNA (1026bp) protein (342aa)
geranylgeranyl-diphosphate synthase; farnesyl-diphosphate synthase (EC:2.5.1.29 2.5.1.10)
Polyprenyl synthetase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW4_9ACTN
Polyprenyl synthetase {ECO:0000313|EMBL:EBA38857.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_133_000M1_scaffold_1184_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16262..17167
DNA (906bp) protein (302aa)
Putative peptidoglycan binding domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z898_9ACTN
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:CDA35085.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
peptidoglycan-binding domain 1 protein
L3_133_000M1_scaffold_1184_13
unknown

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comp(17217..17822)
DNA (606bp) protein (202aa)

This feature has no annotations

L3_133_000M1_scaffold_1184_14
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17948..20155)
DNA (2208bp) protein (736aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73935.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_133_000M1_scaffold_1184_15
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(20315..22204)
DNA (1890bp) protein (630aa)
Carbon starvation protein CstA n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EBW1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73936.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
carbon starvation protein CstA
Displaying 15 items

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