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L3_133_000M1_scaffold_3342

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_3342_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(348..1265)
DNA (918bp) protein (306aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYK0_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98097.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_3342_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1717..2100
DNA (384bp) protein (128aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYJ9_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98096.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_3342_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2148..2324
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYJ8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98095.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_3342_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2864..4639
DNA (1776bp) protein (592aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Threonine--tRNA ligase n=2 Tax=root RepID=G2SYJ7_ROSHA
threonyl-tRNA synthetase
L3_133_000M1_scaffold_3342_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4765..6345
DNA (1581bp) protein (527aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612};; Phosphoglucose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; Phosphohexose isomerase {ECO:0000256|HAMAP-Rule:MF_00473}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Glucose-6-phosphate isomerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYJ6_ROSHA
L3_133_000M1_scaffold_3342_6
unknown

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6382..6903
DNA (522bp) protein (174aa)

This feature has no annotations

L3_133_000M1_scaffold_3342_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6968..7762)
DNA (795bp) protein (265aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYJ5_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98092.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_3342_8
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8176..9684
DNA (1509bp) protein (503aa)
Type I restriction-modification system DNA methylase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BDK6_9CLOT
Type I restriction-modification system DNA methylase {ECO:0000313|EMBL:CDA62288.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
type I restriction-modification system DNA methylase
L3_133_000M1_scaffold_3342_9
Facklamia hominis, Facklamia, Lactobacillales, Bacilli, Firmicutes, Bacteria

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9674..10294
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Facklamia hominis RepID=S3XZQ5_9LACT
Uncharacterized protein {ECO:0000313|EMBL:EKB53916.1}; Flags: Fragment;; TaxID=883111 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Aerococcaceae; Facklamia.;" source="Facklamia hominis CCUG 36813.;"
Type I restriction-modification system, specificity subunit S
L3_133_000M1_scaffold_3342_10
Enterococcus columbae, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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10846..11832
DNA (987bp) protein (329aa)
Uncharacterized protein n=1 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S1N5C8_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOW84210.1}; TaxID=1121865 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus columbae DSM 7374 = ATCC 51263.;"
Site-specific recombinase XerD
L3_133_000M1_scaffold_3342_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

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11845..12405
DNA (561bp) protein (187aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FLJ9_9CLOT
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EEA83046.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_133_000M1_scaffold_3342_12
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(12323..13021)
DNA (699bp) protein (233aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Firmicutes RepID=T4NHX5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDC87226.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Restriction endonuclease S subunits
Displaying 12 items

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