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L3_133_000M1_scaffold_335

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_335_1
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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748..2244
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM0_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96304.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2292..3995
DNA (1704bp) protein (568aa)
Isopentenyl-diphosphate delta-isomerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM1_ROSHA
Isopentenyl-diphosphate delta-isomerase {ECO:0000313|EMBL:AEN96305.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
isopentenyl-diphosphate delta-isomerase
L3_133_000M1_scaffold_335_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4014..6674
DNA (2661bp) protein (887aa)
Small GTP-binding protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM2_ROSHA
Small GTP-binding protein {ECO:0000313|EMBL:AEN96306.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
small GTP-binding protein
L3_133_000M1_scaffold_335_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6699..6947
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM3_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96307.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6892..7401
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM4_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96308.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7432..7575
DNA (144bp) protein (48aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM5_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96309.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7733..8833
DNA (1101bp) protein (367aa)
Hydrogenase large subunit domain protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM6_ROSHA
hydrogenase large subunit domain containing protein
Hydrogenase large subunit domain protein {ECO:0000313|EMBL:AEN96310.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8941..10350
DNA (1410bp) protein (470aa)
RNA methylase NOL1/NOP2/sun family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM7_ROSHA
RNA methylase NOL1/NOP2/sun family protein
RNA methylase NOL1/NOP2/sun family protein {ECO:0000313|EMBL:AEN96311.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_9
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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10499..11458
DNA (960bp) protein (320aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1262991 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:882.;"
L-lactate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BEX1_9FIRM
L-lactate dehydrogenase
L3_133_000M1_scaffold_335_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11527..12132
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM8_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96312.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12238..13839
DNA (1602bp) protein (534aa)
Putative signal transduction histidine kinase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWM9_ROSHA
Putative signal transduction histidine kinase {ECO:0000313|EMBL:AEN96313.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
putative signal transduction histidine kinase
L3_133_000M1_scaffold_335_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14019..15473
DNA (1455bp) protein (485aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN0_ROSHA
response regulator receiver modulated diguanylate cyclase/phosphodiesterase
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AEN96314.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15544..16041
DNA (498bp) protein (166aa)
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN1_ROSHA
ECF subfamily RNA polymerase sigma-24 factor
ECF subfamily RNA polymerase sigma-24 factor {ECO:0000313|EMBL:AEN96315.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16026..16994
DNA (969bp) protein (323aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN2_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96316.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17030..17746
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN3_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96317.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17869..18219
DNA (351bp) protein (117aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN4_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96318.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_17
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18296..19054
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN5_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96319.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_18
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19066..19782
DNA (717bp) protein (239aa)
RNAse H family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN6_ROSHA
RNAse H family protein
RNAse H family protein {ECO:0000313|EMBL:AEN96320.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19824..20939
DNA (1116bp) protein (372aa)
LacI family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN7_ROSHA
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:AEN96321.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21076..22392
DNA (1317bp) protein (439aa)
Glycoside hydrolase clan GH-D n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN8_ROSHA
glycoside hydrolase family protein
Glycoside hydrolase clan GH-D {ECO:0000313|EMBL:AEN96322.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22494..24140
DNA (1647bp) protein (549aa)
L-ribulokinase (Putative) n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWN9_ROSHA
L-ribulokinase (Putative) {ECO:0000313|EMBL:AEN96323.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L-ribulokinase
L3_133_000M1_scaffold_335_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24281..25777
DNA (1497bp) protein (499aa)
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L-arabinose isomerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWP0_ROSHA
L3_133_000M1_scaffold_335_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25898..26551
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Probable transaldolase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWP2_ROSHA
transaldolase
L3_133_000M1_scaffold_335_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26628..27464
DNA (837bp) protein (279aa)
Transketolase domain protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SWP3_ROSHA
transketolase domain containing protein
Transketolase domain protein {ECO:0000313|EMBL:AEN96327.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27452..28390
DNA (939bp) protein (313aa)
Transketolase, C-terminal subunit n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T198_ROSHA
transketolase, C-terminal subunit
Transketolase, C-terminal subunit {ECO:0000313|EMBL:AEN96328.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28420..29115
DNA (696bp) protein (232aa)
L-ribulose-5-phosphate 4-epimerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T199_ROSHA
L-ribulose-5-phosphate 4-epimerase
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:AEN96329.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29175..30221
DNA (1047bp) protein (349aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Aldose 1-epimerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1A0_ROSHA
aldose 1-epimerase
L3_133_000M1_scaffold_335_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30415..31407
DNA (993bp) protein (331aa)
AraC family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1A1_ROSHA
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AEN96331.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31537..32958
DNA (1422bp) protein (474aa)
Rhamnulokinase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1A2_ROSHA
rhamnulokinase
Rhamnulokinase {ECO:0000313|EMBL:AEN96332.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_335_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32955..34205
DNA (1251bp) protein (417aa)
L-rhamnose isomerase (EC:5.3.1.14)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L-rhamnose isomerase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1A3_ROSHA
Displaying items 1-30 of 42 in total

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