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L3_133_000M1_scaffold_363

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_363_1
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..327)
DNA (327bp) protein (109aa)
Putative uncharacterized protein n=1 Tax=Eubacterium rectale M104/1 RepID=D4JIQ4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK93501.1}; TaxID=657317 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale M104/1.;"
L3_133_000M1_scaffold_363_2
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(401..1435)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 8_2_54BFAA RepID=H1ALC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHQ46327.1}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
hypothetical protein
L3_133_000M1_scaffold_363_3
Clostridium hathewayi CAG:224, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1438..1731)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi CAG:224 RepID=R5TX65_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ63536.1}; TaxID=1263067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium hathewayi CAG:224.;"
hypothetical protein
L3_133_000M1_scaffold_363_4
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1839..2408)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7AQ23_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC57795.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L3_133_000M1_scaffold_363_5
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2432..5509)
DNA (3078bp) protein (1026aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9KQ59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS48473.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
type III restriction protein res subunit
L3_133_000M1_scaffold_363_6
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5513..6790)
DNA (1278bp) protein (426aa)
Putative type I restriction-modification system n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5W265_9FIRM
Putative type I restriction-modification system {ECO:0000313|EMBL:CCZ94184.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
type I restriction-modification system specificity determinant
L3_133_000M1_scaffold_363_7
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6787..8520)
DNA (1734bp) protein (578aa)
N-6 DNA methylase n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VUM6_9FIRM
N-6 DNA methylase {ECO:0000313|EMBL:CCZ94185.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
N-6 DNA methylase
L3_133_000M1_scaffold_363_8
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8544..8759)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5WEG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ94186.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
hypothetical protein
L3_133_000M1_scaffold_363_9

Not on your lists

comp(9234..10526)
DNA (1293bp) protein (431aa)
transposase n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B43FD3
Uncultured bacterium extrachromosomal DNA RGI01328 {ECO:0000313|EMBL:CDL66438.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative transposase
L3_133_000M1_scaffold_363_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10519..11448)
DNA (930bp) protein (310aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
2-dehydropantoate 2-reductase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T340_ROSHA
2-dehydropantoate 2-reductase
L3_133_000M1_scaffold_363_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11503..12159)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T341_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97135.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12172..12462)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T342_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97136.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12516..13094)
DNA (579bp) protein (193aa)
GCN5-related N-acetyltransferase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T343_ROSHA
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEN97137.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_14
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13207..13353)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T344_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97138.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13702..15069
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T346_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97140.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15119..17227)
DNA (2109bp) protein (703aa)
ABC transporter related protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T347_ROSHA
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:AEN97141.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_17
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17587..19191
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
phosphoenolpyruvate carboxykinase (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T349_ROSHA
L3_133_000M1_scaffold_363_18
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19729..21432)
DNA (1704bp) protein (568aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T350_ROSHA
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEN97144.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21487..22749)
DNA (1263bp) protein (421aa)
Basic membrane lipoprotein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T351_ROSHA
basic membrane lipoprotein
Basic membrane lipoprotein {ECO:0000313|EMBL:AEN97145.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_20
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22924..24999)
DNA (2076bp) protein (692aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T352_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97146.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_21
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25023..25343)
DNA (321bp) protein (107aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T353_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97147.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25650..26087)
DNA (438bp) protein (146aa)
Nitrogen fixation protein NifU-like protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T354_ROSHA
nitrogen fixation protein NifU-like protein
Nitrogen fixation protein NifU-like protein {ECO:0000313|EMBL:AEN97148.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26080..27288)
DNA (1209bp) protein (403aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Cysteine desulfurase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T355_ROSHA
SufS subfamily cysteine desulfurase protein
L3_133_000M1_scaffold_363_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27285..28373)
DNA (1089bp) protein (363aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T356_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97150.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28385..29791)
DNA (1407bp) protein (469aa)
Fe-S cluster assembly protein SufB n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T357_ROSHA
Fe-S cluster assembly protein SufB
Fe-S cluster assembly protein SufB {ECO:0000313|EMBL:AEN97151.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29788..30561)
DNA (774bp) protein (258aa)
FeS assembly ATPase SufC n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T358_ROSHA
FeS assembly ATPase SufC
FeS assembly ATPase SufC {ECO:0000313|EMBL:AEN97152.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31261..31650)
DNA (390bp) protein (130aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T359_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97153.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31709..33382
DNA (1674bp) protein (558aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Hydroxylamine reductase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T360_ROSHA
hybrid cluster protein
L3_133_000M1_scaffold_363_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33445..34446)
DNA (1002bp) protein (334aa)
Transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T361_ROSHA
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AEN97155.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_363_30
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34487..35995)
DNA (1509bp) protein (503aa)
Alpha-N-arabinofuranosidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T362_ROSHA
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:AEN97156.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
alpha-N-arabinofuranosidase
Displaying items 1-30 of 40 in total

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