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L3_133_000M1_scaffold_663

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_663_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..207
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFZ8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57425.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_133_000M1_scaffold_663_2
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(339..830)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C9U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23785.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Relaxase/Mobilisation nuclease domain.
L3_133_000M1_scaffold_663_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(855..1955)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C9U0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23785.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L3_133_000M1_scaffold_663_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1927..2325)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBE5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77932.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Bacterial mobilisation protein (MobC).
L3_133_000M1_scaffold_663_5
Coprococcus eutactus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2752..2949)
DNA (198bp) protein (66aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A8SX42_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP25472.1}; TaxID=411474 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus eutactus ATCC 27759.;"
hypothetical protein
L3_133_000M1_scaffold_663_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2927..3385)
DNA (459bp) protein (153aa)
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K8L8_9FIRM
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog {ECO:0000313|EMBL:CBL01181.1}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
L3_133_000M1_scaffold_663_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3553..4005)
DNA (453bp) protein (151aa)
DNA-binding helix-turn-helix protein n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FZP1_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG91938.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
XRE family transcriptional regulator
L3_133_000M1_scaffold_663_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4467..6566)
DNA (2100bp) protein (700aa)
Heat shock protein 90 n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1B6_ROSHA
heat shock protein 90
Heat shock protein 90 {ECO:0000313|EMBL:AEN96346.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_663_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6703..9708
DNA (3006bp) protein (1002aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1B7_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN96347.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_663_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9774..10055
DNA (282bp) protein (94aa)
Polysaccharide deacetylase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T1B8_ROSHA
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEN96348.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_663_11
unknown

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10055..10510
DNA (456bp) protein (152aa)

This feature has no annotations

L3_133_000M1_scaffold_663_12
unknown

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10558..10950
DNA (393bp) protein (131aa)

This feature has no annotations

L3_133_000M1_scaffold_663_13
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11110..11982
DNA (873bp) protein (291aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGN2_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96061.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
chromosome partitioning protein
L3_133_000M1_scaffold_663_14
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11984..13390
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGN1_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96060.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
chromosome partitioning protein, ParB family
L3_133_000M1_scaffold_663_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13426..14529
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FM72_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA82851.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_133_000M1_scaffold_663_16
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14928..15788)
DNA (861bp) protein (287aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L1R3_9FIRM
Protein of unknown function (DUF2726).
Uncharacterized protein {ECO:0000313|EMBL:CDA55260.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_133_000M1_scaffold_663_17
unknown

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15999..16409
DNA (411bp) protein (137aa)

This feature has no annotations

L3_133_000M1_scaffold_663_18

Not on your lists

17446..17841
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1RXY3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC46295.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_663_19
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17905..19812
DNA (1908bp) protein (636aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5LSS8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY82238.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_133_000M1_scaffold_663_20
Clostridium kluyveri, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19877..20467)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Clostridium kluyveri RepID=B9DX07_CLOK1
hypothetical protein
Conserved protein {ECO:0000313|EMBL:EDK35611.1}; TaxID=431943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680).;"
L3_133_000M1_scaffold_663_21
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20594..20986
DNA (393bp) protein (131aa)
Single-stranded DNA-binding protein n=4 Tax=Firmicutes RepID=D4L214_9FIRM
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_133_000M1_scaffold_663_22
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20993..22918
DNA (1926bp) protein (642aa)
hypothetical protein n=1 Tax=Desulfitobacterium hafniense RepID=UPI00038257F8
TRAG protein {ECO:0000313|EMBL:KJR45211.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. I2.;"
TRAG family protein
L3_133_000M1_scaffold_663_23
unknown

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22942..23301
DNA (360bp) protein (120aa)

This feature has no annotations

L3_133_000M1_scaffold_663_24
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23305..24183
DNA (879bp) protein (293aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGJ9_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96121.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
L3_133_000M1_scaffold_663_25
unknown

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24183..24413
DNA (231bp) protein (77aa)

This feature has no annotations

L3_133_000M1_scaffold_663_26
unknown

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24423..24782
DNA (360bp) protein (120aa)

This feature has no annotations

L3_133_000M1_scaffold_663_27
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24754..25362
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGJ7_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96119.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_133_000M1_scaffold_663_28
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25382..27289
DNA (1908bp) protein (636aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GGJ6_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA96118.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_133_000M1_scaffold_663_29

Not on your lists

27291..28478
DNA (1188bp) protein (396aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1T1X7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC60050.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_133_000M1_scaffold_663_30
unknown

Not on your lists

28488..29018
DNA (531bp) protein (177aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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