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L3_133_000M1_scaffold_723

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_133_000M1_scaffold_723_1
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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699..3476
DNA (2778bp) protein (926aa)
RecF/RecN/SMC N-terminal domain protein n=1 Tax=Ruminococcus obeum ATCC 29174 RepID=A5ZRG2_9FIRM
RecF/RecN/SMC N-terminal domain protein {ECO:0000313|EMBL:EDM87780.1}; TaxID=411459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum ATCC 29174.;"
PHP family phosphoesterase fused to chromosome segregation ATPase
L3_133_000M1_scaffold_723_2
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3882..4151
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T488_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97693.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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4212..5600
DNA (1389bp) protein (463aa)
MATE family multidrug resistance protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T487_ROSHA
MATE family multidrug resistance protein
MATE family multidrug resistance protein {ECO:0000313|EMBL:AEN97692.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_4
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5742..6764
DNA (1023bp) protein (341aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYA3_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97691.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_5
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6761..7996
DNA (1236bp) protein (412aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYA2_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97690.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_6
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8124..9608
DNA (1485bp) protein (495aa)
Dipeptidase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYA1_ROSHA
dipeptidase
Dipeptidase {ECO:0000313|EMBL:AEN97689.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_7
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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9620..10555
DNA (936bp) protein (312aa)
Hydrogenase accessory protein HypB2 n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYA0_ROSHA
hydrogenase accessory protein HypB2
Hydrogenase accessory protein HypB2 {ECO:0000313|EMBL:AEN97688.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_8
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10565..11524
DNA (960bp) protein (320aa)
Spore photoproduct n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY99_ROSHA
spore photoproduct
Spore photoproduct {ECO:0000313|EMBL:AEN97687.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_9
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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11496..12527
DNA (1032bp) protein (344aa)
Spore photoproduct n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY98_ROSHA
spore photoproduct
Spore photoproduct {ECO:0000313|EMBL:AEN97686.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_10
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12539..13300
DNA (762bp) protein (254aa)
Putative short-chain dehydrogenases/reductase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY97_ROSHA
putative short-chain dehydrogenases/reductase
Putative short-chain dehydrogenases/reductase {ECO:0000313|EMBL:AEN97685.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_11
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13297..14646
DNA (1350bp) protein (450aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY96_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97684.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_12
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14809..14910
DNA (102bp) protein (34aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY95_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97683.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14914..15378
DNA (465bp) protein (155aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY94_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97682.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_14
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15403..15534
DNA (132bp) protein (44aa)
Uncharacterized protein n=4 Tax=Roseburia RepID=C7G9R3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDA54686.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
L3_133_000M1_scaffold_723_15
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15674..16597)
DNA (924bp) protein (308aa)
LysR family regulatory protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY92_ROSHA
LysR family regulatory protein
LysR family regulatory protein {ECO:0000313|EMBL:AEN97680.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_16
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16600..18045)
DNA (1446bp) protein (482aa)
MATE efflux family protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY91_ROSHA
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AEN97679.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_17
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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18383..19402
DNA (1020bp) protein (340aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG95588.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG95588.1};; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Phosphoglycerate dehydrogenase (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP84_9FIRM
L3_133_000M1_scaffold_723_18
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19436..20632
DNA (1197bp) protein (399aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Histidinol-phosphate aminotransferase n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FP83_9FIRM
histidinol-phosphate aminotransferase
L3_133_000M1_scaffold_723_19

Not on your lists

20868..21737
DNA (870bp) protein (290aa)
Extracellular solute-binding protein, family 3 (Fragment) n=1 Tax=human gut metagenome RepID=K1T1V0_9ZZZZ
Extracellular solute-binding protein, family 3 {ECO:0000313|EMBL:EKC63858.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
polar amino acid ABC uptake transporter substrate binding protein
L3_133_000M1_scaffold_723_20
Enterococcus pallens, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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21762..22478
DNA (717bp) protein (239aa)
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2SEE3_9ENTE
His/Glu/Gln/Arg/opine family amino ABC transporter, permease, 3-TM region {ECO:0000313|EMBL:EOH86499.1}; TaxID=1158607 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus pallens ATCC BAA-351.;"
amino acid ABC transporter permease
L3_133_000M1_scaffold_723_21
Paenibacillus borealis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22475..23182
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Enterococcus pallens ATCC BAA-351 RepID=R2RT73_9ENTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ57165.1}; TaxID=160799 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus borealis.;"
L3_133_000M1_scaffold_723_22
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23231..23980
DNA (750bp) protein (250aa)
Amino-acid ABC transporter ATP-binding protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY89_ROSHA
amino-acid ABC transporter ATP-binding protein
Amino-acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AEN97677.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_23
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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24012..24599
DNA (588bp) protein (196aa)
Cytidylate kinase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY88_ROSHA
cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:AEN97676.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_24
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24646..25890
DNA (1245bp) protein (415aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY87_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97675.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_25
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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25975..26382
DNA (408bp) protein (136aa)
Putative small membrane protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY86_ROSHA
putative small membrane protein
Putative small membrane protein {ECO:0000313|EMBL:AEN97674.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_26
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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26375..27250
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY85_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97673.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_27
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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27247..28152
DNA (906bp) protein (302aa)
MarR family transcriptional regulator n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY84_ROSHA
MarR family transcriptional regulator
MarR family transcriptional regulator {ECO:0000313|EMBL:AEN97672.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_28
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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28531..29619
DNA (1089bp) protein (363aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Phosphonate-transporting ATPase n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY82_ROSHA
phosphonate-transporting ATPase
L3_133_000M1_scaffold_723_29
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29609..30268
DNA (660bp) protein (220aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SY81_ROSHA
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:AEN97669.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_133_000M1_scaffold_723_30
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30316..31236
DNA (921bp) protein (307aa)
ABC-type metal ion transport system, periplasmic component/surface antigen n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L270_9FIRM
ABC-type metal ion transport system, periplasmic component/surface antigen
ABC-type metal ion transport system, periplasmic component/surface antigen {ECO:0000313|EMBL:CBL13710.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Displaying 30 items

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